Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3203 |
Symbol | tolB |
ID | 4883609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 3136273 |
End bp | 3137565 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640129131 |
Product | translocation protein TolB |
Protein accession | YP_001060215 |
Protein GI | 126440889 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.95129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGC TAGGTTTCAG GGCACTCGTG GCCTCGTGTC TGATTGCCGC GGGCGGCGCC GCCCACGCGC AGGTGAACGT TCTGATCACG GGCGTCGGCT CCACCCAGTT TCCGATCGCC ACCGCGAATT TCGTCAACGA AGCGAGCCTG CCGCAGCAGG TCACGTCGGT CGTGCGCGGC GACCTCGCGC GAAGCGGCAA ATTCTCCAAC GTCGACGCGG GCAGCACGCC CGTGCCGGAA ACCGCATCGG TCGATTTCGG CGCATGGAAG GCGAAAGGCG CGAACGCATT CGTCGCGGGC AGCGTGAACC GCGAGCCGAA CGGCCAGTAC AAGGTCAACT TCATCCTCTA CGACACCGTC AAGCAGCAAA GCCTCGGAGG GCTGTCGCTC ACGACGTCGA ACGACAACGA GGGGATGCGC AAGACCGGCC ACAAGATCGC CGACTACATC TACCAAAAGC TGCTCGGCGT GCGCGGCGTC TTCAACACGC GCCTGTCGTA CGTGCAGCGC ACGGGCAACG TCTACAAGCT GCTGATCTCC GATTCGGACG GCCAGAACGC GATCCCCGCG CTCACGAGCA AGGAGCCGAT CATCTCGCCC GCGTGGTCGC CGAGCGGCAC GAAGGTTGCG TACGTATCGT TCGAGTTGAG AAAGCCCGTC GTGTACATCC ACGATCTGCC GACCGGGCGC CGCTACGTGA TCTCGAACCA GAAAGGCAAC AACAGCGCGC CCGCGTGGTC GCCGGATGGC CAGACGCTTG CCGTCGCGCT GTCGCTCACG GGCAATACGC AGATTTACTC CGTCAGCTCG ACGGGCACCG GGCTGCGCCG CTTGACGCGC AGCAGCTCGA TCGACACCGA GCCGTTCTAC TCGCCTGACG GCAAGTGGAT CTATTTCACG AGCGACCGCG GCGGCGCGCC GCAAATCTAC CGGATGCCCG CCGAAGGCGA GAGCGCCGGC GCCGCTCAGC GCGTGACGTT TACCGGCAGC TACAATACGA GTCCGCGCGT CAGCCCGGAC GGCAAGCTGC TCGCGTACAT CTCACGCACG GGCGGGGGCT TCAAGCTGTA CGTTCAGGAT CTGCAATCGG GTGCGGCGAA CGCCGTCACC AACACGACGC GCGACGAATC GCCGAGCTTC GCGGCGAATG GTCAGTACAT TCTGTACGCT ACACAATCGG GGGGCCGCAG CGTGCTGGCT GCCGTTCCGT CCGACGGCAG CGCGCCGCCG CAGATCTTGT CCGTTCAGGG CGGCGCGATC CGCGAGCCGT CCTGGGGGCC CTTCATGCAA TGA
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Protein sequence | MTKLGFRALV ASCLIAAGGA AHAQVNVLIT GVGSTQFPIA TANFVNEASL PQQVTSVVRG DLARSGKFSN VDAGSTPVPE TASVDFGAWK AKGANAFVAG SVNREPNGQY KVNFILYDTV KQQSLGGLSL TTSNDNEGMR KTGHKIADYI YQKLLGVRGV FNTRLSYVQR TGNVYKLLIS DSDGQNAIPA LTSKEPIISP AWSPSGTKVA YVSFELRKPV VYIHDLPTGR RYVISNQKGN NSAPAWSPDG QTLAVALSLT GNTQIYSVSS TGTGLRRLTR SSSIDTEPFY SPDGKWIYFT SDRGGAPQIY RMPAEGESAG AAQRVTFTGS YNTSPRVSPD GKLLAYISRT GGGFKLYVQD LQSGAANAVT NTTRDESPSF AANGQYILYA TQSGGRSVLA AVPSDGSAPP QILSVQGGAI REPSWGPFMQ
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