| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2902 |
|---|
| Symbol | fdhA |
|---|
| ID | 4884569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 2858243 |
|---|
| End bp | 2861197 |
|---|
| Gene Length | 2955 bp |
|---|
| Protein Length | 984 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640128830 |
|---|
| Product | formate dehydrogenase, alpha subunit |
|---|
| Protein accession | YP_001059920 |
|---|
| Protein GI | 126438525 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.679741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTT CCGCATTCGA TTCGTCCCGG CAAGGCTGCG GCTCCGGCCA GTGCGCGTGC
CGGCGCGCCG CGCAGACGCG GCGCGCCGAT CCGTTCGACG ACACCGACTA CGGCACCCCG
ACGCGCCACG CGGACACCGA CGTCACGCTC GATATCGACG GCCGCGCGGT CACGGTGCCG
GCGGGCACGT CGGTGATGCG CGCGGCGATC GAAGCCGGCA TCAACGTGCC GAAGCTCTGC
GCGACCGATT CGCTCGAGCC GTTCGGCTCG TGTCGCCTGT GCCTCGTCGA GATCGAAGGC
CGGCGCGGCT ATCCGGCCTC GTGCACGACG CCCGTCGAGG CCGGCATGAG GGTGCGCACG
CAAAGCGACC GGCTGCAGGC GCTGCGCCGC AACGTGATGG AGCTCTACAT CTCCGATCAT
CCGCTCGACT GTCTCACGTG CGCGGCGAAC GGCGATTGCG AGCTGCAGGA CATGGCGGGC
GCGGTCGGCC TGCGCGAGGT GCGCTACGGC TTCGACGGCA AGAACCATCT GAGCGACGCG
AAGGACGAAT CGAACCCGTA CTTCAGCTAC GATCCGTCGA AATGCATCGT TTGCAATCGC
TGCGTGCGCG CGTGCGAGGA GACGCAGGGC ACGTTCGCGC TGACGATCGC CTCGCGCGGC
TTCGAATCGC GGGTCGCGGC GAGCGCGGGC GAGGCGTTCA TGGATTCGGA ATGCGTATCG
TGCGGCGCAT GCGTCGCCGC GTGCCCGACC GCGACGCTCG TCGAGAAAAG CGTCGCGCGG
CTCGGTCAGC CCGAGCACGA GATCGTGACG ACCTGCGCGT ACTGCGGCGT CGGCTGCGCG
CTGAAGGCGG AAATGAAGGG CGAGCAGGTC GTGCGGATGA CGCCGCACAA GAACGGCCTC
GCGAACGAAG GCCACGCGTG CGTGAAAGGC CGCTTCGCGT GGGGCTATGC GACGCACAAG
GACCGCATCA CGAAGCCGAT GATCCGCGAG AAGATCACCG ACGCGTGGCG CGAAGTGAGC
TGGGACGAAG CAATCGGCTA CGCGGCCGCG CGCTTTCGCC GCATCCAGGA CGAGCACGGC
CGCGATTCGA TCGGCGGCAT CACGTCGTCG CGCTGCACGA ACGAAGAGAC GTATCTCGTG
CAGAAGCTCG TGCGCGCGGC GTTCGGCAAC AACAATGTCG ACACTTGCGC GCGCGTGTGC
CATTCGCCGA CGGGCTACGG CCTGAAAACC ACGCTCGGCG AATCGGCCGG CACGCAGACG
TTCGCGTCGG TCGGCTCGGC CGACGTGATC GTCGTGATCG GCGCGAATCC GACCGACGGC
CATCCGGTGT TCGGCTCGCG CCTGAAGCGC CGCGTGCGCG AGGGCGCGCA GCTGATCGTC
GTCGATCCGC GCCGGATCGA TCTCGTCGAC GGCCCGCACG TGAAGGCCGT CCACCATCTG
CAACTGCGCC CCGGCACGAA CGTCGCGCTC GTCAACGCGC TCGCGCACGT GATCGTCACC
GAGGGCCTCG TCGACGAAGC GTTCGTCGCC GAGCGCTGCG AGCCGCAGGC GTTCGACGTA
TGGCGCGCGT TCGCCGCGCG GCCCGAGAAT TCGCCCGAGG CGACGGCGGA CATCACGGGC
GTGCCGGCCG ACGCGGTGCG CGCCGCCGCG CGCCTGTACG CGACGGGCGG GCGCGCGGCG
ATTTTCTACG GGCTCGGCGT GACCGAGCAC GCGCAGGGCT CGACGATGGT GATGGGCATC
GCGAACCTCG CGATGGCGAC GGGCAATCTC GGCATCGAAG GCGCGGGCGT GAACCCGCTG
CGCGGGCAGA ACAACGTGCA GGGCTCGTGC GACATGGGTT CGTTCCCGCA CGAGCTGCCC
GGCTACCGGC ACATCGGCGA CGCCGCGGTG CGCGCGCGCT TCGACGAAGC GTGGTCGACG
ACGCTGCAGC CCGAGCCCGG CCTGCGCATT CCGAACATGT TCGACGCGGC GCTCGACGGC
AGTTTCAAGG GGCTCTATTG CCAGGGCGAG GACATCGTCC AGTCCGATCC GAACACGCAG
CACGTCGCGG CCGCGCTGGC GTCGCTCGAC TGCCTCGTCG TGCAGGACAT CTTCCTGAAC
GAAACCGCGA AGTACGCGCA CGTATTCCTG CCGGGCGCGA CCTTCCTCGA GAAGGACGGC
ACGTTCACGA ACGCGGAGCG CCGGATCTCG CGCGTGCGCC GCGCGATGCG GCCGCTTTCT
GGCTACGCGG ACTGGGAAGT GACGCTGATG CTGTCGCGCG CGCTCGGCTA CGACATGCAT
TACGCGCATC CGTCCGAGAT CATGGACGAG ATCGCGCGCC TCACGCCGAC GTTCGCGGGC
GTGTCGTACG CGCTGCTCGA CGAGCTGGGC AGCGTCCAGT GGCCGTGCAA CGACGCGGCG
CCGCAAGGCA CGCCGACGAT GCACGTCGAT CAGTTCGTGC GCGGCAAGGG CAAGTTCGTC
ATCACGCAGT ACATCGCGTC GCCGGAGAAG GTGACGCCGC GCTATCCGCT CATCCTGACG
ACGGGCCGCA TTCTGTCGCA GTACAACGTC GGCGCGCAGA CGCGCCGCAC GGAGAACGTC
CGCTGGCACG GCGAGGATCG GCTCGAGATC CATCCGCACG ACGCGAACGA TCGCGGCATC
CGGACAGGCG ACTGGGTCGG CGTCGCATCG CGCGCCGGGC AGACGGTGCT GCGCGCGCTC
GTCACCGAGC GGATGCAGCC GGGCGTCGTC TACACGACGT TCCACTTCCC GGAATCGGGC
GCGAACGTGA TCACGACCGA CAGCTCGGAC TGGGCGACCA ACTGCCCCGA GTACAAGGTG
ACGGCCGTGC AGGTCGCGCC CGTCGCGCAG CCGTCCGAAT GGCAGCGCGC GTACACGCGC
TTTCGCGCGG AGCAGCTCGC GCTGCTCGAG CAGCGCACGG CCGAGCGCGC GCCGGCCATC
GCCACGGGCA AGTGA
|
|---|
| Protein sequence | MTSSAFDSSR QGCGSGQCAC RRAAQTRRAD PFDDTDYGTP TRHADTDVTL DIDGRAVTVP
AGTSVMRAAI EAGINVPKLC ATDSLEPFGS CRLCLVEIEG RRGYPASCTT PVEAGMRVRT
QSDRLQALRR NVMELYISDH PLDCLTCAAN GDCELQDMAG AVGLREVRYG FDGKNHLSDA
KDESNPYFSY DPSKCIVCNR CVRACEETQG TFALTIASRG FESRVAASAG EAFMDSECVS
CGACVAACPT ATLVEKSVAR LGQPEHEIVT TCAYCGVGCA LKAEMKGEQV VRMTPHKNGL
ANEGHACVKG RFAWGYATHK DRITKPMIRE KITDAWREVS WDEAIGYAAA RFRRIQDEHG
RDSIGGITSS RCTNEETYLV QKLVRAAFGN NNVDTCARVC HSPTGYGLKT TLGESAGTQT
FASVGSADVI VVIGANPTDG HPVFGSRLKR RVREGAQLIV VDPRRIDLVD GPHVKAVHHL
QLRPGTNVAL VNALAHVIVT EGLVDEAFVA ERCEPQAFDV WRAFAARPEN SPEATADITG
VPADAVRAAA RLYATGGRAA IFYGLGVTEH AQGSTMVMGI ANLAMATGNL GIEGAGVNPL
RGQNNVQGSC DMGSFPHELP GYRHIGDAAV RARFDEAWST TLQPEPGLRI PNMFDAALDG
SFKGLYCQGE DIVQSDPNTQ HVAAALASLD CLVVQDIFLN ETAKYAHVFL PGATFLEKDG
TFTNAERRIS RVRRAMRPLS GYADWEVTLM LSRALGYDMH YAHPSEIMDE IARLTPTFAG
VSYALLDELG SVQWPCNDAA PQGTPTMHVD QFVRGKGKFV ITQYIASPEK VTPRYPLILT
TGRILSQYNV GAQTRRTENV RWHGEDRLEI HPHDANDRGI RTGDWVGVAS RAGQTVLRAL
VTERMQPGVV YTTFHFPESG ANVITTDSSD WATNCPEYKV TAVQVAPVAQ PSEWQRAYTR
FRAEQLALLE QRTAERAPAI ATGK
|
|---|
| |