Gene BURPS668_2802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_2802 
Symbolrne 
ID4882775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp2766102 
End bp2769368 
Gene Length3267 bp 
Protein Length1088 aa 
Translation table11 
GC content72% 
IMG OID640128730 
Productribonuclease E 
Protein accessionYP_001059823 
Protein GI126442124 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.61809e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA TGCTGTTCAA TGCGACGCAG CAGGAAGAAC TGCGCGTCGC CATCGTCGAT 
GGGCAGAAGC TCATCGATAT CGATATCGAA ACCGCCGGCC GCGAACAGCG CAAAGGCAAC
ATCTACAAGG GCGTCGTCAC CCGCATCGAA CCGTCGCTCG AAGCCTGCTT CGTCAATTAC
GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAGTCG CCCGCCAGTA CTTCAAGGAA
GGCGTCGACA TGCGCTCCGC GCGCATCCAG GACGCGCTGC GCGAGGGCCA GGAGCTGATC
GTCCAGGTCG AGAAGGAAGA GCGCGGCAAC AAGGGCGCGG CGCTTACCAC CTTCATCTCG
CTCGCCGGCC GCTACCTCGT GCTGATGCCG AACAACCCGC GCGGCGGCGG CGTGTCGCGC
CGCATCGAGG GCGACGAGCG CCAGGAACTG CGCGAGACGA TGGCGCAACT GCAGATCCCC
GACGGCATGA GCATGATCGC CCGCACCGCG GGCATCGGCC GCAGCGCCGA GGAACTGCAG
TGGGACCTGA ACTACCTGCT GCAGCTCTGG CGCGCGATCG AGGCGGCGTC GCAAAGCGGC
CACCCCGGCC AGCCGATGCT GATCTACCTC GAATCGAGCC TCGTGATCCG AGCGATCCGG
GACTATTTCC AGCCGGACAT CGGCGAAATC CTGATCGACA CGACCGAGAT CCACGATCAG
GCGCGCGCGT TCATGGACAT CGTGATGCCC GACAACGTCG GCAAGGTGAA GCGCTATCAC
GACGACGTGC CCCTCTTCTC GCGCTTCCAG ATCGAGCACC AGATCGAAAC CGCGTACTCG
CGCACGGTGC CGCTGCCGTC GGGCGGCGCG ATCGTGATCG ACCACACCGA GGCGCTCGTC
GCGATCGACG TGAACTCGGC GCGCGCGACC AAGGGCGCGG ACATCGAGGA AACGGCGACC
CGCACGAACC TCGAGGCGGC CGACGAAGTC GCCCGCCAGT TACGTCTGCG CGACCTGGGC
GGCCTGATCG TGATCGACTT CATCGACATG GAATCGGCCA AGAGCCAGCG CGAAGTCGAG
CAGCGCCTGA AGGACGCGCT CAAGCACGAC CGCGCGCGCG TGCAGATGGG CAAGATCTCG
CGCTTCGGCC TGATGGAGCT GTCGCGCCAG CGCCTGCGCC CGGCCCTGTC CGAAGGCAGC
CACGTCACCT GCCCGCGCTG CAACGGCACG GGCCACATCC GCGACACCGA ATCGTCCGCG
CTGCAAGTGC TGCGGATCAT TCAGGAAGAA GCGATGAAGG AGAACACCGC GGCGATCCAC
TGTCAGGTGC CCGTCGAGGT GACGGCCTTC CTGCTCAACG AAAAGCGCCA GGAAATCAAT
AAGATCGAAT CGCGCTTCAA GGTCGGCGTC GTGCTGATTC CGAACAAGCA CCTCGATACG
CCGCACTACA AGCTCGAGCG CCTGCGTCAC GACGATGCGC GCCTCGACGA TCCGCGCGCA
TCGTGGAAGA TGGCCGAGGA AGCCGCCCGC GAGCTCGAGG CGGAAACCGG CTACAGCAAG
CGCGCCGAGG AAACGAAGCC GCGCCAGGAA GCGGCCGTCA AGGGCATCAC GCCCGAGCGG
CCGGCGCCGA GCCCCGCGCC GCAGCGCCAG AGCGCGCCGG AAGCGGCGGC GCCCGTGGCC
GCCGCGCCCG CGAGCGGCGG CGGTTTCATG AAATGGCTGA AGGGCCTGTT CGGCGCGCAG
CCGGCTGCGG TGCCCGCACC GGCGCCCGCC GCGCAGGAAA CGGCTGCGCG TCCGGCGCGC
GAGCGCGCGG AGCGTGGTGA GCGCGGCGAG AAGGCCGAGC GCGGCGAACG CGGCGGCGAT
CGCAACCGCA ACCGCCGCGG CGGCGCCGCG CAGCAGGCGG GTGGACGCGA CCAGGCGGCG
GCAGGCGGCG GCCGCGCTCA GGCGCCGCGC GCCGAGCGCG AAGGCAAGGA AACCCGCGAG
CCGCGCGAAG GCCGCGAAGC ACGCGGCGGC CGGGACAACC GGGAAGGCCG CGAGGCGCGC
GAAACCCGCG AGCCCCGTGA ACAACGCGAA CCGCGCGAGG CACGCGAGCA GCGCGAAGCG
CGCGAGCGCG CCGAAACGGT CGACGCCGCG GAAGCCCCGC GCGGCGAGCG CCGTGAACGC
GGCGAGCGCC GTAAGCCGGC CCCGCATGTC GCGACGCTCG AAACGGTGAA TCGCGGCGAA
AGCGCACATG CGGAAACCGC CGAAAAGCCG CTGTACGCGC CTGGCGCGGA AGCCGGCGTC
GACGCGGATT CGAACGCACG CGACGGCGAA GAACGCCGCC GCCGCCGCCG TGGCCGCCGT
GGCGGCCGCC GCGAGCGTGA AGACGAAGTC GCGGGCGCCG TGCAGGCGGC GGAAGGCAGC
GAAGGCGTGA CGGCCGAGGC CGAAGCGCTC GAGCACGCCG AGCACGCCGA GCACGCGCAA
CAACGCGTCG CGCCGGTAGC GAACCAAGCG CCCGAGCATG CCGCGCAAGC GGGTGCGGGC
GTCGCGGCGG CAGCCGCCGC GACCGTCGCA GCCGAGGCGA TTGCGCATGT CGAGAGCGGC
GCGAAGGTCG AGCCGCAACC GGCGGCCGAG GCATCCGCTG GCGATACGGA ACAGGCCGAG
GCGGTGCCCG CGCGGTCCAT CGAAGCACCG GCGCAAGCGG CTTCGACGGG TCAAGCGGAA
GCCGTGCAAG CCGCACCGGC CGCACCGGCA CACGTGACGC CGGCCACGGC CGACGTCGCG
CGCGAGCCGG CCGCGCCTGC CGAAACTGCG TCTGCCGAAA CTACGCCTGC TGAAATCCCG
CCTGCCGAAG CCGCGCCCGC CGAAGCACCG GCCGCGGAAG CGTCCGAAGT GGCCGCGAGC
GCGGTCGCTT CGGCCCCGGC CCCGGCCGCG GAGCCCGCGC CGGCCGCCGA GCCGCACCGG
CCGGCGCCCG TCTCGGCCGC CCCCGCCTCG GCCGCGCCGG CCGAAGCGGA CGCCGCGCGC
GAGCCGGCCG CCGTCGCCGA GCCGCACGTG CCGGCGGCCG CCGCGACCCC TACCCCGGCT
TCGGTGGCGA CCACGCCGGG CGCGAGCCTC GATACGGCGC TCGCGGCCGC CGGCCTTGTC
TGGGTCAATA CCGACACGGA CAAGCTGCGC GCCGCACAGG CCGCCGCCGC GCAAATCGTG
CAGCCCGTGC GCGTGCCGCG CGAACGCAAG CCGCTGCCGC CCGTCGACGC GACGCCGATG
CAGCAGGTCG AGACGACGCA CCGCTGA
 
Protein sequence
MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGVVTRIE PSLEACFVNY 
GEDRHGFLPF KEVARQYFKE GVDMRSARIQ DALREGQELI VQVEKEERGN KGAALTTFIS
LAGRYLVLMP NNPRGGGVSR RIEGDERQEL RETMAQLQIP DGMSMIARTA GIGRSAEELQ
WDLNYLLQLW RAIEAASQSG HPGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTTEIHDQ
ARAFMDIVMP DNVGKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV
AIDVNSARAT KGADIEETAT RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE
QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA
LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRQEIN KIESRFKVGV VLIPNKHLDT
PHYKLERLRH DDARLDDPRA SWKMAEEAAR ELEAETGYSK RAEETKPRQE AAVKGITPER
PAPSPAPQRQ SAPEAAAPVA AAPASGGGFM KWLKGLFGAQ PAAVPAPAPA AQETAARPAR
ERAERGERGE KAERGERGGD RNRNRRGGAA QQAGGRDQAA AGGGRAQAPR AEREGKETRE
PREGREARGG RDNREGREAR ETREPREQRE PREAREQREA RERAETVDAA EAPRGERRER
GERRKPAPHV ATLETVNRGE SAHAETAEKP LYAPGAEAGV DADSNARDGE ERRRRRRGRR
GGRREREDEV AGAVQAAEGS EGVTAEAEAL EHAEHAEHAQ QRVAPVANQA PEHAAQAGAG
VAAAAAATVA AEAIAHVESG AKVEPQPAAE ASAGDTEQAE AVPARSIEAP AQAASTGQAE
AVQAAPAAPA HVTPATADVA REPAAPAETA SAETTPAEIP PAEAAPAEAP AAEASEVAAS
AVASAPAPAA EPAPAAEPHR PAPVSAAPAS AAPAEADAAR EPAAVAEPHV PAAAATPTPA
SVATTPGASL DTALAAAGLV WVNTDTDKLR AAQAAAAQIV QPVRVPRERK PLPPVDATPM
QQVETTHR