| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2783 |
|---|
| Symbol | |
|---|
| ID | 4882239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2749472 |
|---|
| End bp | 2750980 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640128711 |
|---|
| Product | Do family protease |
|---|
| Protein accession | YP_001059804 |
|---|
| Protein GI | 126439161 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.96749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATC CCTCGCTGCG CACCTGGCTC GTCGCCGCGG CGGTGACGGC CTTGACGCCG
CTTGCCGCGC AATCGGCGAC GGCGGCTCCG AATGTCACGA CCACGCCCGC CGCAACGGGC
GCCGCGCCCG CGGCGCGCGC GGGCCTGCCC GATTTCGCGG ACCTCGTCGA GCGGGTCGGC
CCGGCGGTCG TCAACATCCG GACGACGGCG AACGTGCCGG CCGATACGCG CGGCGCGCTG
CCGCCCGGCC TCGACAACGG CGACATGTCG GAGTTCTTCC GCCGCTTCTT CGGCATTCCG
TTGCCGCAGG GGCCGGGCGG GCAGAAGAAC GCGCCGAGCA CGCCCGATGC GCCCGACACC
GAGCAGAACC GCGGCGTGGG CTCGGGCTTC ATCCTGTCGC CGGACGGCTA TGTGATGACG
AACGCGCACG TCGTCGACGA CGCGGACACG ATCTACGTGA CGCTCACCGA CAAGCGCGAA
TTCAAGGCAA AGCTCATCGG CGTCGACGAG CGCACGGACG TCGCGATCGT GAAGATCAAC
GCGTCGAGCC TGCCGACCGT CGCGATCGGC GATTCGAACC GCGTGCGCGT CGGCGAATGG
GTCGTCGCGA TCGGTTCGCC GTTCGGCCTC GACAACACCG TCACGGCCGG CATCGTCAGC
GCAAAGGGCC GCAACACCGG CGACTATCTG CCGTTCATCC AGACGGACGT CGCGGTCAAC
CCCGGCAACT CGGGCGGCCC GCTCATCAAC ATGCAGGGCG AGGTGATCGG CATCAACTCG
CAGATCTACA GCCGCACGGG CGGCTTCATG GGCATTTCGT TCGCGATTCC GATCGACGAG
GCGATGCGCG TCGCCGAGCA ACTGAAGGCA TCGGGCAAGG TCACGCGCGG CCGGATCGCG
GTCGCGATCG GCGAGGTGAC GAAGGAAGTG GCGGATTCGA TCGGCCTGCC GAAGGCCGAA
GGCGCGCTCG TCAGCAGCGT CGAGCCAGGC GGCCCGGCCG ACAAGGCGGG CCTGCAGCCG
GGTGACATCA TCCTGAAGTT CAACGGCCGT CCGGTGGAGG CGGCGTCGGA TCTGCCGCGC
ATGGTCGGCG ACACGAAGCC GGGCGCGAAG GCGACGGTGA CGGTGTGGCG CAAGGGGCAA
TCGCGCGATC TGCCGATCAC GATCGCGGAA TTCCCGGCCG ACAAGGCCGC GAAGGCCGAC
AGCCGTCAGG CGCCGCAGCA GAAGCCGCGC AGCAGCGCGC TCGGCCTGAC GGTCAGCGAC
CTGTCGCCCG AGCAGTTGAA GACGCTCAAG CTGCGCAACG GCGTGCAGAT CGACGCGGTC
GACGGCCCGG CCTCGCGCGC GGGGCTGCAG CGCGGCGACA TCGTGCTGCG CGTCGGCGAC
GTCGACATCA CGAGCGCGAA GCAGTTCGTC GACGTGACGT CGAAGCTCGA TCCGCAGCGC
GCGGTCGCGG TGCTCGTGCG GCGCGGCGAG AACACGCAGT TCATCCCGAT CCGGCCGCGT
CAGAAGTGA
|
|---|
| Protein sequence | MMNPSLRTWL VAAAVTALTP LAAQSATAAP NVTTTPAATG AAPAARAGLP DFADLVERVG
PAVVNIRTTA NVPADTRGAL PPGLDNGDMS EFFRRFFGIP LPQGPGGQKN APSTPDAPDT
EQNRGVGSGF ILSPDGYVMT NAHVVDDADT IYVTLTDKRE FKAKLIGVDE RTDVAIVKIN
ASSLPTVAIG DSNRVRVGEW VVAIGSPFGL DNTVTAGIVS AKGRNTGDYL PFIQTDVAVN
PGNSGGPLIN MQGEVIGINS QIYSRTGGFM GISFAIPIDE AMRVAEQLKA SGKVTRGRIA
VAIGEVTKEV ADSIGLPKAE GALVSSVEPG GPADKAGLQP GDIILKFNGR PVEAASDLPR
MVGDTKPGAK ATVTVWRKGQ SRDLPITIAE FPADKAAKAD SRQAPQQKPR SSALGLTVSD
LSPEQLKTLK LRNGVQIDAV DGPASRAGLQ RGDIVLRVGD VDITSAKQFV DVTSKLDPQR
AVAVLVRRGE NTQFIPIRPR QK
|
|---|
| |