Gene BURPS668_2610 details

Gene Information

• Locus tag: BURPS668_2610
• Symbol: lpdA
• ID: 4883477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: -
• Start bp: 2577674
• End bp: 2579443
• Gene Length: 1770 bp
• Protein Length: 589 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640128538
• Product: pyruvate dehydrogenase complex E3 component, dihydrolipoamide dehydrogenase
• Protein accession: YP_001059636
• Protein GI: 126441363
• COG category: [C] Energy production and conversion
• COG ID: [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
• TIGRFAM ID: [TIGR01350] dihydrolipoamide dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTCA TCGAAGTCAA GGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC 
GAGGTCAACG TCAAACCCGG CGACGTGATC GAAAAAGAGC AAACGCTCAT CACGCTCGAA 
TCCGATAAAG CCTCCATGGA AGTGCCGAGC GACGTCGCCG GCACCGTGAA GGAAATCAAG 
ATCAAGGCCG GCGACAAAGT CTCGCAAGGC ACCGTCATCG CCATCGTCGA AGCATCGGCA 
GGCGCCGCCG CACCCGCACC CGCGAAAGCC CCCGAAGCAC CGAAGCCCGC AGCAGTTGCA 
CCGGCTCCGG CCGCCGCCCC GGCACCCGCG CTGCAAGCCG GCAGCTACAG CGGCTCCGCC 
GACATCGAGT GCGACATGCT CGTGCTCGGC GCCGGCCCCG GCGGCTACTC GGCCGCGTTC 
CGCGCCGCCG ACCTCGGCAT GAAGACGGTG CTGGTCGAAC GCTACTCGAC GCTCGGCGGC 
GTGTGCCTGA ACGTCGGCTG CATTCCGTCA AAGGCATTGC TGCACACGGC GCTCGTCGTC 
GAGGAAGCGC AGGCGCTCGC GTCGCACGGC ATCACGTTCG GCAAGCCGCA GGTCGAGCTC 
GACAAGCTGC GCGATTTCAA GGGCGGCGTC GTCAAGAAGC TGACGACGGG CCTCGCCGGC 
ATGGCGAAGG CGCGCAAGGT CGAAGTGGTC ACGGGCGTCG GCGCGTTCGT CGATCCGTAT 
CACATGGAAG TGCAGGGCGA AAACGGCAAG AAGATCGTCA AGTTCAAGCA GGCGATCATC 
GCCGCCGGCT CGCAGGCGGT GAAGCTGCCG TTCATGCCGG AAGACCCGCG CGTCGTCGAT 
TCGACGGGCG CGCTCGAACT GCGTCAGTTG CCCAAGCGCA TGCTCGTGAT CGGCGGCGGC 
ATCATCGGCC TCGAAATGGC GACGGTGTAC TCCACGCTCG GCGCCGAGAT CGACGTCGTC 
GAAATGATGG ACGGCCTGAT GATGGGCGCG GACCGCGATC TCGTGAAGGT CTGGGAAAAG 
TACAACGCGA AGCGCTTCGG CAACGTGATG CTCAAGACCA AGACGGTCGG CGCGCAAGCG 
AAGGAAGACG GCATCTACGT GACGTTCGAG GGCGAGAAGG CGCCGGCGCA AGCGCAGCGC 
TACGACCTCG TGCTCGTCGC GGTGGGCCGC AGCCCGAACG GCAAGAAGAT CGGCGCCGAC 
AAGGCGGGCG TGGCGGTCAC CGACCGCGGC TTCATCGACG TCGACAAGCA GATGCGCACG 
AACGTGCCGC ACATCTTCGC GATCGGCGAC ATCGTCGGCC AGCCGATGCT CGCGCACAAG 
GCCGTGCATG AAGGCCACGT CGCGGCCGAA GCCGCGCACG GCGAGAAGGC GTACTTCGAC 
GCGCTGCAGA TCCCGTCGGT GGCGTACACC GATCCGGAAG TGGCATGGGC CGGCAAGACG 
GAAGACCAGT GCAAGGCCGA GGGCATCAAG TATGGCAAGG CGGTGTTCCC GTGGGCTGCG 
TCGGGCCGCG CGATCGCGAA CGGCCGCGAC GAGGGCTTCA CGAAGCTGCT CTTCGACGAG 
GAAACCCACC GCGTGATCGG CGGCGGCATC GTCGGCCTGA ACGCGGGCGA CCTGATCAGC 
GAAGTGTGCC TCGCGGTCGA GATGGGCGCG GACGCGGAAG ACATCGGCAA GACGATCCAT 
CCGCACCCGA CGCTCGGCGA ATCGATCGGC ATGGCCGCCG AGCTGTACGA AGGCGTTTGC 
ACGGATCTGC CGCCGCAGCG CAAGAAGTAA 

 

Protein sequence

MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEIK 
IKAGDKVSQG TVIAIVEASA GAAAPAPAKA PEAPKPAAVA PAPAAAPAPA LQAGSYSGSA 
DIECDMLVLG AGPGGYSAAF RAADLGMKTV LVERYSTLGG VCLNVGCIPS KALLHTALVV 
EEAQALASHG ITFGKPQVEL DKLRDFKGGV VKKLTTGLAG MAKARKVEVV TGVGAFVDPY 
HMEVQGENGK KIVKFKQAII AAGSQAVKLP FMPEDPRVVD STGALELRQL PKRMLVIGGG 
IIGLEMATVY STLGAEIDVV EMMDGLMMGA DRDLVKVWEK YNAKRFGNVM LKTKTVGAQA 
KEDGIYVTFE GEKAPAQAQR YDLVLVAVGR SPNGKKIGAD KAGVAVTDRG FIDVDKQMRT 
NVPHIFAIGD IVGQPMLAHK AVHEGHVAAE AAHGEKAYFD ALQIPSVAYT DPEVAWAGKT 
EDQCKAEGIK YGKAVFPWAA SGRAIANGRD EGFTKLLFDE ETHRVIGGGI VGLNAGDLIS 
EVCLAVEMGA DAEDIGKTIH PHPTLGESIG MAAELYEGVC TDLPPQRKK