Gene BURPS668_2347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_2347 
Symbol 
ID4885334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp2322130 
End bp2322972 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID640128275 
Productputative phytoene synthase 
Protein accessionYP_001059379 
Protein GI126439688 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID[TIGR03465] squalene synthase HpnD 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTCG ACGAATACTG CCAGCAGAAA GCCGCGCCGC CCGGCTCCAG TTTTTACTAT 
GCGCTGCGCC AGGCGCCGCT CGCGCGCCAG CCGCTCGTCG CCGCGCTGTT CGCGCTGCGT
CGCGAGCTCG AGCAAACGGT GAAGGAAGTC AGCGATCCGA CCGTCGGCCA CACCAAGCTC
GCGTGGTGGC AAAAGGAGCT CGCCGCGCTC GCATCCGGCC ATCCGTCGCA TCCGGTGTCG
CAAGCGCTCG CCGCGCATCA TCCGGACATC GCGCGCGAAA CCGATGCGCT GCGCACGCTC
GTCGCCGGTT ACGGAATGGA CCTCGAGCAG GCGCGCTATC TGGACTTCGC GAACCTGCGC
CGTTACGCCG ATCAAACGGG CGGCATGTTC GCCGCGCTCG TCGCAAGCGC CAGCGCCGGC
GCCGGCCGGC CCACCGCGAA CGGCGCGCGC TGGGCGCAGC CGCTCGGCCA GGCGCTCACG
CTCGCGCAAT TCGTGCAGGA TCTCGGGCAG GATGCGCGGC AGGGCCGCAT CTACGTGCCG
ATCGACGAGT TGCAACGCTA CGGCGTGACG GCCGCCGATC TCCTCAACCG CCGCTACAGC
CCCGCCTACA CCGAGCTGAT GCGCTTCCAG ACGTCACGCG CGCGCGACGC ACTCAACGCG
TCGCTATCCG GCATTCCCGC CGACGAGCGG CGCGCGCAGC GCACGCTGCG CGCGCTCGGC
GCGCTCGCGC TCGCGGTGCT CGACGAGATC GAGCGCGACG GCTTTCAGGT GCTGCATCAG
CGGATCGCGC TCACGCCGAT CCGCAAGCTG TGGATCGCAT GGCGCGCCGC GCGGCGCCGC
TGA
 
Protein sequence
MNFDEYCQQK AAPPGSSFYY ALRQAPLARQ PLVAALFALR RELEQTVKEV SDPTVGHTKL 
AWWQKELAAL ASGHPSHPVS QALAAHHPDI ARETDALRTL VAGYGMDLEQ ARYLDFANLR
RYADQTGGMF AALVASASAG AGRPTANGAR WAQPLGQALT LAQFVQDLGQ DARQGRIYVP
IDELQRYGVT AADLLNRRYS PAYTELMRFQ TSRARDALNA SLSGIPADER RAQRTLRALG
ALALAVLDEI ERDGFQVLHQ RIALTPIRKL WIAWRAARRR