| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2323 |
|---|
| Symbol | clpP |
|---|
| ID | 4882301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 2303820 |
|---|
| End bp | 2304473 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640128251 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_001059356 |
|---|
| Protein GI | 126440189 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0415791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATC GCGCTCAATT GCTGGACACG TTGGCTTCGC AAGCCCCGCG GGATTTCGAG
GCGCAAGCGC TCGGGCTCGT GCCGATCGTC GTCGAGACGA GCGGCCGCGG CGAGCGTTCG
TACGATATCT ACTCGCGGCT CCTGAAAGAG CGCATCGTGT TCATGGTCGG CGAGGTCAAC
GACCAGACGG CGAATCTCGT GGTCGCGCAG TTGCTGTTCC TCGAAAGCGA GAATCCCGAC
AAGGACATCA GCCTGTACAT CAACAGCCCG GGCGGTTCGG TATCGGCGGG GATGGCGATC
TACGACACCA TGCAGTTCGT GAAGCCGGAC GTGTCGACGC TCTGCATGGG CCTCGCGGCC
AGCATGGGCG CGTTCCTGCT CGCGTCGGGC GCGAAGGGCA AGCGCTACGC GCTGCCGAAC
GCGCGCGTGA TGATCCACCA GCCGCTGGGC GGGGCACGCG GCCAGGCGTC GGATATCGAG
ATCCAGGCGC GCGAGATCCT CTACCTGAGG GATCGCCTGA ATCACCTGCT CGCCCACCAT
ACCGGCCAGG ACGTCGAGCG CATCGCGCGC GACACCGACC GTGATAATTT CATGTCCAGC
GAAGATGCGA AGGCGTACGG CCTGATCGAC CACGTGTCGA CGAAGCGCCC GTAA
|
|---|
| Protein sequence | MINRAQLLDT LASQAPRDFE AQALGLVPIV VETSGRGERS YDIYSRLLKE RIVFMVGEVN
DQTANLVVAQ LLFLESENPD KDISLYINSP GGSVSAGMAI YDTMQFVKPD VSTLCMGLAA
SMGAFLLASG AKGKRYALPN ARVMIHQPLG GARGQASDIE IQAREILYLR DRLNHLLAHH
TGQDVERIAR DTDRDNFMSS EDAKAYGLID HVSTKRP
|
|---|
| |