Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2322 |
Symbol | clpX |
ID | 4885108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 2302388 |
End bp | 2303659 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640128250 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001059355 |
Protein GI | 126441050 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00946213 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGACA AGAAAGGTTC GAACAGCGAG AAGCTGTTGT ATTGCTCGTT TTGCGGCAAA AGCCAGCATG AGGTGAAGAA GCTCATCGCG GGGCCGTCGG TATTCATCTG CGATGAATGT ATCGACTTGT GCAACGAGAT CATCCGCGAC GAAGCGGCCG CGGCGGGCGT CGAAGCCAGC CTGTCCAAAT CCGACCTGCC GAGCCCGCAG GAGATTCGCG ACATCCTCGA TCAGTACGTG ATCGGCCAGG AGCGCGCGAA GAAGATCCTC GCCGTCGCCG TCTACAATCA CTACAAGCGC CTGAAGCATC TCGACAAGAA GGACGATGTC GAGTTGTCGA AGAGCAACAT CCTGTTGATC GGCCCGACGG GCTCCGGCAA GACGCTGCTC GCGCAGACTC TCGCGCGCCT GCTGAACGTG CCGTTCGTGA TCGCCGACGC GACCACGCTG ACGGAGGCCG GTTATGTCGG CGAGGACGTC GAGAACATCA TCCAGAAGCT GCTGCAGAAC TGCAACTACG AGGTCGAGAA GGCGCAGCGC GGGATCGTCT ACATCGACGA AATCGACAAG ATCAGCCGCA AGTCGGACAA CCCGTCGATC ACCCGCGACG TGTCGGGCGA GGGCGTCCAG CAGGCGCTGC TCAAGCTCGT CGAGGGCACG ATGGCGTCGG TGCCGCCGCA GGGCGGCCGC AAGCACCCGA ACCAGGATTT CATCCAGGTC GACACCACCA ACATCCTGTT CATTTGTGGC GGCGCGTTCG ACGGCCTCGA GAAGGTGATC ACCGACCGCA CCGAGAAGAC CGGCATCGGT TTCGGCGCGA CGGTCAAGAG CAAGCAGGAG CGGGACGCGG GCGAAGTGCT GCGCGAGGTC GAGCCGGAAG ACCTGATCAA ATTCGGGTTG ATCCCCGAGT TGATCGGCCG TCTGCCGGTG GTCGCGACGC TCGGCAAGCT CGACGAAGCC GCGCTGATGA AGATTCTCGT CGAGCCGAAG AACGCGCTCG TCAAGCAGTA TCAGAAGCTG TTCGCGATGG AGCGGGTCGA ACTCGAGATT CGTCCGGACG CGCTGCAAGC CGTCGCCCGC AAGGCGATCC GCCGCAAGAC GGGCGCGCGC GGGCTGCGTT CGATCATCGA GCAGGCGCTC CTCGACGTGA TGTACGAACT GCCGACGCTC AAGGGCGTCA GCAAGGTGAT CATCGACGAC AATGTCATCG AAGGAGACGG CAAGCCGTTA TTGATCTATG AGGACACGCC GAAAGTGGCG GGTTCGAATT GA
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Protein sequence | MADKKGSNSE KLLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD EAAAAGVEAS LSKSDLPSPQ EIRDILDQYV IGQERAKKIL AVAVYNHYKR LKHLDKKDDV ELSKSNILLI GPTGSGKTLL AQTLARLLNV PFVIADATTL TEAGYVGEDV ENIIQKLLQN CNYEVEKAQR GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLVEGT MASVPPQGGR KHPNQDFIQV DTTNILFICG GAFDGLEKVI TDRTEKTGIG FGATVKSKQE RDAGEVLREV EPEDLIKFGL IPELIGRLPV VATLGKLDEA ALMKILVEPK NALVKQYQKL FAMERVELEI RPDALQAVAR KAIRRKTGAR GLRSIIEQAL LDVMYELPTL KGVSKVIIDD NVIEGDGKPL LIYEDTPKVA GSN
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