Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2162 |
Symbol | rimO |
ID | 4884435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 2152392 |
End bp | 2153783 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640128090 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_001059197 |
Protein GI | 126440905 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.692729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAATT CATTGAAATC AAGCGGTAAG CCGCTCGCCG CGCCCAAGGT GGGTATGGTT TCGCTCGGGT GCCCGAAGGC CCTCGTCGAC TCCGAGCAGA TCATCACGCA ACTGCGCGCC GAAGGCTACG AAATCTCCGG CACCTATGAC GGCGCGGATC TCGTCGTCGT CAACACTTGC GGCTTCATCG ACGAGGCGGT GCAGGAAAGC CTCGACGCGA TCGGCGAAGC GCTCGCCGAA AACGGCAAGG TGATCGTCAC CGGCTGCCTC GGCGCGAAGA AGAGCGCGAG CGGCTCCGGC CTCATCGCGG AAGTGCATCC GAAGGTGCTC GCCGTCACGG GCCCGCATGC GGTCGGCGAA GTGATGCAGG CGGTGCACAG CCATCTGCCG AAGCCGCACG ATCCGTTCGT CGACCTCGTG CCGGCCGCGG GCATCAAGCT CACGCCGCGT CACTACGCGT ATCTGAAGAT CTCCGAAGGC TGCAATCACC GCTGCTCGTT CTGCATCATC CCGTCGATGC GCGGCGAGCT CGTGTCGCGG CCCGTCGCCG AGGTGATGCT CGAAGCCGAG AATCTCTTCA AGTCCGGCGT GAAGGAACTG CTCGTGATCT CGCAGGACAC GAGCGCGTAC GGCGTCGACG TCAAGTACCG CACGGGCTTC TGGAACGGCC GGCCGCTCAA GACGCGGATG ACCGAGCTCG TCGGCGCGCT CGGCGAGCTC GCCGCGCAGT ACGGCGCGTG GGTGCGCCTG CACTACGTGT ATCCGTATCC GCACGTCGAC GAGATCATTC CGATGATGGC GCAAGGCCCG CTCAAGGGCC ATGTGCTGCC GTATCTCGAC GTGCCGTTCC AGCACGCGCA TCCGGAGGTG CTCAAGCGAA TGAAGCGCCC GGCGAACGCG GAGCGGGTGC TCGAGCGCGT GCAGAAGTGG CGCGAGATCT GCCCGGATCT GACGATTCGC AGCACGTTCA TTGCCGGCTT TCCGGGCGAG ACCGACGCGC AATTCGAGAC ACTCCTCGAT TTCATCCGCG ACGCCGAGCT CGATCGCGTC GGCTGCTTCG CGTATTCTCC GGTCGAGGGC GCGAGCGCGA ACGCGCTCGA CGGCGCGCTG CCCGACGACG TGCGCGAGGC GCGCCGCGCG CGCTTCATGG AAGTCGCCGA GGAGGTGTCC GCCGCGCGCA TCGCGCGCAA GATCGGCAAG ACGCTCAAGG TGTTGATCGA CGAGGTCAAC GCAGAAGGCG GCATCGGCCG CACCGCGGCC GATGCGCCCG AGATCGACGG CGTCGTCTAT GTCGAGCCGG CGGCCAAGGC GTCGAAGCGC TACAAGGTCG GCGAGTTCGT GTCCGTGAAG ATCACGGGCG CCGACAGCCA CGATCTGTGG GGCGAGGTCT GA
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Protein sequence | MENSLKSSGK PLAAPKVGMV SLGCPKALVD SEQIITQLRA EGYEISGTYD GADLVVVNTC GFIDEAVQES LDAIGEALAE NGKVIVTGCL GAKKSASGSG LIAEVHPKVL AVTGPHAVGE VMQAVHSHLP KPHDPFVDLV PAAGIKLTPR HYAYLKISEG CNHRCSFCII PSMRGELVSR PVAEVMLEAE NLFKSGVKEL LVISQDTSAY GVDVKYRTGF WNGRPLKTRM TELVGALGEL AAQYGAWVRL HYVYPYPHVD EIIPMMAQGP LKGHVLPYLD VPFQHAHPEV LKRMKRPANA ERVLERVQKW REICPDLTIR STFIAGFPGE TDAQFETLLD FIRDAELDRV GCFAYSPVEG ASANALDGAL PDDVREARRA RFMEVAEEVS AARIARKIGK TLKVLIDEVN AEGGIGRTAA DAPEIDGVVY VEPAAKASKR YKVGEFVSVK ITGADSHDLW GEV
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