Gene BURPS668_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_2127 
Symbol 
ID4884359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand- 
Start bp2118187 
End bp2118831 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID640128055 
ProductOmpW family outer membrane protein 
Protein accessionYP_001059162 
Protein GI126438701 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.767621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGTC AAACAATTCG TACTTGCACC ACCGCCATCG CTTGCGCAGC CGGTCTTGCG 
ATGATTCCGT CGCTGTCGCA TGCGGCTTCG CCCGGAGAGG GCATCAATCA AGGCGACATC 
ATCGCGCGCG TTCGCGGGAT CAGCATCATG CCGGACGAGC GCACGAGCAA TACGTTGTCG 
GCGCTGAACG TGGGCGTGAA CAATGCGATC GTCCCCGAGC TCGATTTCAC GTACATGATT 
CGCGACTACC TGGGCGTCGA GCTGATCCTC GGCACGTCGC GGCATCAGAT CACGTCGTCG 
CTCGGCGATC TCGGCGGCGT CGGCGTGCTG CCGCCGACGC TGCTGTTGCA GTACCACTTC 
AACCATGCCG GCAAGGTGCG TCCGTATGTC GGCGCGGGCA TCAACTACAC GCTGTTCTAC 
AACAACGGGC TGCACGCGGG CAGCGAGGGG ATCGGGATCA ACAACCACAG CTTCGGTCCC 
GCGCTGCAGT TCGGCGTCGA TGTGCAAGTG ACGAAGAAGG TGTTCGTCAA CGTCGACGTG 
AAGAAGATCT GGATGCACAC CGATGCGACG CTCGGCGGCC AGCCGCTCGG CCGGCTGAAC 
ATCGATCCGC TCGTCGTGGG CGTCGGCGTC GGGATGAAGT TCTAG
 
Protein sequence
MRRQTIRTCT TAIACAAGLA MIPSLSHAAS PGEGINQGDI IARVRGISIM PDERTSNTLS 
ALNVGVNNAI VPELDFTYMI RDYLGVELIL GTSRHQITSS LGDLGGVGVL PPTLLLQYHF 
NHAGKVRPYV GAGINYTLFY NNGLHAGSEG IGINNHSFGP ALQFGVDVQV TKKVFVNVDV 
KKIWMHTDAT LGGQPLGRLN IDPLVVGVGV GMKF