| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1891 |
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| Symbol | oprA |
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| ID | 4883621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 1854343 |
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| End bp | 1855884 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640127819 |
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| Product | outer membrane efflux protein OprA |
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| Protein accession | YP_001058926 |
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| Protein GI | 284159952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.271004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC CCCGGGCCCG GCGGCGCGGC GCGCGCGCAG CGCGGCGGCC GAACGGGCTG
CGGGCCTGGC CGCTCGCGGT CGCGGCCGCG CTCGTCGCGG GCTGCACGCT CGCGCCGCGC
TACGAGCGGC CGGCCGCGCC CGTGCCGGCG CATTATTGGT CGACGGCGGC GGGCGCGCCG
CGCGAGGCGG GCCCGGCGGC CGCCGGCGGC CCGCGCGCGA TGCCGGACGC GCGCGGCGGC
GACGCCGGGC GCGACGCCCG CGACGCGCGG CTCGACGACT GGCGCGCGTA TTTCACCGAT
CCGGCGCTGC GCGCGCTGAT CGACGCGGCG CTCGCGAACA ATCGCGACCT GCGGATCGCG
ACGCTGCGTA TCCAGGAAGC GCGCGGCCTC TACGGCGTCG CGCGCGCGGA CCGGCTGCCG
TCGATCGACG GCAGCCTCGG CTACGAGCGC ACGCGGCTTT ACGACCCGGT GCTGCGCGAG
AGCGCGACGA GCTCGCTGTA TCGCGCGAGT GTCGGCGTGA GCGCGTTCGA GATCGATCTG
TTCGGCCGCG TGAAGAGCCT CTCGGACGCG GCGCTCGCCG AGTACTTCGC GACCGCCGAG
GCGCAGCGCG CGGCGCGCAT CAGCCTGATC GCCGAAGTCG CGTCCGCGTA CGTGACCGAG
CGCGCGCTCG TCGATCAACT GGGGCTCGCC GAACGCACGC TCGCCGCGCG CGACGCGGCC
TACGCGCTCA CGCAGCGCCG TTACGCGGCC GGCACGAGCA CGGCGATCGA GCTGCGCACG
GCCGAGATGC TCGTCGCGTC GGCGCGCGCG TCGAAGGCGG CGCTCGAGCG CGAGCACACG
CAGGCGGCGA GCGCGCTGAA GCTGCTCGCG GGCGACTTCA TGACGGCGCT GCCCGCCGAT
GCGCCCGCGC TCGACGCGCT CGCGGTGGCG CGGGTGTCGC CGGGGCTGCC GTCGGATCTG
CTCGAGCAGC GCCCGGACAT CCGGCAGGCC GAGCAGCGCC TCGTCGCGGC GAACGCGAAC
ATCGGCGCGG CGCGCGCGGC GTTCTTCCCG CGCATCGCGC TCACGACCGA CGTCGGCTCG
GTGAGCGACG CGTTCGCGGG ACTCTTCTCG GCCGGCTCGA GCGTGTGGAC GTTCGCGCCG
CGGCTCACGC TGCCGATTTT CGCGGGCGGG CGCAATCGTG CGAATCTCGA CGTGGCGGAC
GCGCGCAAGC ATATCGCGGT CGCCGAATAC GAGAAGACGA TCCAGACGGC GTTTCGCGAA
GTCGCCGATG CGCTCGCGGC GCGCGATCAG ATCGACGCGC AGCTTGCCGC GCAGCAGGCG
GTCTACGGTG TGGACGCGGA GCGGCTGCGG CTTGCGCAGC GGCGCTACGA CAGCGGCGTG
GCGAGCTATC TCGAGCTGCT CGACGCGCAG CGCAGCACGT TCGAGTCCGG GCAGGAGCTG
ATTCGCCTGA AGCAGCTGCG GCTCACGAAC GCGATCACGC TGTATCGCGC GCTGGGCGGG
GGCTGGTCGC GCGCCGGGTG CGGCGGCGAT GGGTGTGCTT GA
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| Protein sequence | MMKPRARRRG ARAARRPNGL RAWPLAVAAA LVAGCTLAPR YERPAAPVPA HYWSTAAGAP
REAGPAAAGG PRAMPDARGG DAGRDARDAR LDDWRAYFTD PALRALIDAA LANNRDLRIA
TLRIQEARGL YGVARADRLP SIDGSLGYER TRLYDPVLRE SATSSLYRAS VGVSAFEIDL
FGRVKSLSDA ALAEYFATAE AQRAARISLI AEVASAYVTE RALVDQLGLA ERTLAARDAA
YALTQRRYAA GTSTAIELRT AEMLVASARA SKAALEREHT QAASALKLLA GDFMTALPAD
APALDALAVA RVSPGLPSDL LEQRPDIRQA EQRLVAANAN IGAARAAFFP RIALTTDVGS
VSDAFAGLFS AGSSVWTFAP RLTLPIFAGG RNRANLDVAD ARKHIAVAEY EKTIQTAFRE
VADALAARDQ IDAQLAAQQA VYGVDAERLR LAQRRYDSGV ASYLELLDAQ RSTFESGQEL
IRLKQLRLTN AITLYRALGG GWSRAGCGGD GCA
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