Gene BURPS668_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1807 
Symbol 
ID4883980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1780609 
End bp1781268 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID640127735 
ProductHis/Glu/Gln/Arg/opine amino acid ABC transporter permease 
Protein accessionYP_001058844 
Protein GI126441429 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCA CTTCCCTCCT CGCCCAATCG CTCCCGGTCC TGCTCCAGGG CGCGCTCCTG 
ACCGTCAAGT TCGCCGTGCT GTCGATGCTG TTCGGGCTCG TCGGCGCCGT CGCGCTCGCG
CTGATGGGCA TCGGCCGCAG CCGGGTGCTG GCCGGCCTCG CTCGCGCGTA CGTGAGCGTG
ATGCGCGGCA CGCCGCTCCT CGTGCAGATC TTCGTCGTCT ATTACGGATT GCCAAGCCTC
GGCGTGTCGC TCGATCCGAC GCCCGCCGGC GTGATCGCGC TGTCCGCGAA CGTCGCCGCT
TACATGTCCG AAAGCATGCG CGGCGCGATC AACGGGATCG ACAAGGGGCA ATGGCTCGCC
GCGTACAGCC TCGGGCTGTC GTGGCGGCAG ACGCTGCGCT ACGTGATCGG GCCGCAGGCG
CTGCGCATCG CGGTGCCGAG CCTGTCGAAC AGCCTCATCA GCCTGATCAA GGACACGTCG
CTCGTGTCGG TGATCACCGT CACCGAGCTG CTGCGCAGCG CGCAGGAAAT CATCGCGTCG
ACCTATCAGC CGTTGCCGCT GTATCTCGCC GCGGCGGCCG TCTACTGGGT GCTGTGCCAG
ATCCTCGAAT GGGTGCAGCG CTGGTACGAG CGGCGGCTCG CGTTGCCGAG CCGGCACTGA
 
Protein sequence
MPITSLLAQS LPVLLQGALL TVKFAVLSML FGLVGAVALA LMGIGRSRVL AGLARAYVSV 
MRGTPLLVQI FVVYYGLPSL GVSLDPTPAG VIALSANVAA YMSESMRGAI NGIDKGQWLA
AYSLGLSWRQ TLRYVIGPQA LRIAVPSLSN SLISLIKDTS LVSVITVTEL LRSAQEIIAS
TYQPLPLYLA AAAVYWVLCQ ILEWVQRWYE RRLALPSRH