Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1745 |
Symbol | |
ID | 4882803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 1721640 |
End bp | 1723136 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640127673 |
Product | NodT family efflux transporter outer membrane lipoprotein |
Protein accession | YP_001058784 |
Protein GI | 126440140 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.134149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCT TCCCGTTGTC CGCTTGCCGG ACCGCCGTGG CCGTCGCGGT CGCCGCGCTC GCGCTCGCGG GATGCGCGAA CTATTTCGGC CTCAAGAGCG ACAAGGCGAT CGCTCCCGCG GCGCAGTTCG AAAGCGCGCG GAGCCTGCCC GCGCAGGGCG GCCAATGGCC GTCGCTCGAC TGGGCGAACC AGTTCGGCGA TCCGCAATTG CCGAAGCTGA TCGACGAGGC GCTCGAAGGC AATCCGACGA TCGCGCAGGC GCAGGCGCGC ATCGCGAAGG CGTCGTCGTA CATCGAGTCG TCGCGCTCGA CGCTGCTGCC GAAGGCCGAC GCGAAGTACT CGTGGACCCG CGAGCTGTAC TCGGGCAACG CTCTTTTCCC GCCCCCGTAC GGCGGCCAGT GGTACAGCGA GAACAACGCG CTCGCGAGCG CGTCGTGGGA GCTCGATCTG TGGGGCAAGA ACCGCGCGCG CCTGAATGCG GCCGTGTCGC AGGAAAAGGC CGCCGAAGCC GACCTGCAGC AGGCGCGCGT GACGCTCGCG ACGTCGGTCG CGCGCACGTA CAACCAGCTC GCGCAACTGT ACGCGCTGCG CGACATCGCC GGGCGCGAGA TCTCGAACCG GCAGACGGTC GGCAAGATCA CCGACGGCCG CGTCGGCGCG GGCCTCGACA CGAACGTCGA GCGCCAGACC GCGCGCGGCA ACATCGCGAC GAGCCAGTCG ACGCTGTCCG ATCTCGACGG CCAGATCACG AACGTCCGCT ATCAGCTCGC CGCGCTGCTC GGCAAAGGTC CGGACCGCGG GCTGCAGATC GCCGCGCCCG TGCTGAGCGC GGGCGGCGCG GTCGCGCTGC CGGAGAACCT GCCCGCCGAT CTCGTGTCGC GCCGCCCGGA TCTCGTCGCC GCGCGCTGGC AGGTCGAAGC GGCGATGCAC GACGTGAAGG AAGCGAAAGC CGAGTTCTTT CCGGACATCA ACCTCGCGGC GGGCTTCGGC TTCGACGCGT TCGGCTGGGG CCGATTCCTG AACTTCGCGA GCCGCCAGGC GCAGTTCGGC CCCGCGATCC ACCTGCCGAT CTTCGACGGC GGCGCGCTGC GCGCGCAATT GAAGGGCCGC TACGCGGACT TCGATCTGTC GGTCGCGAAC TACAACCAGA CGCTCATCAA CGCGCTGAAC GACGTCGCGA CGCAAGTCGC GTCGATTCGC TCGGTCGACA CGCAAATGGG CGACGCGCAG CGCGCGCTCG ATGCGTCGAC GCGCGCCTAC GAGCTCGCGG TGATCCGCTA CAAGGCGGGC CTGTCGCCGC AGTTGCAGGT GCTCAACGCG GACAGCAACC GGCTCGCCGC CGAGCAGACG GTGACGAACC TGAAGATGCG CCGCCGCGAC CTGCAGATCG GCCTCGTGAA GGCGCTCGGC GGCGGCTTCG ACGCGGCCGG CACGCGGCTC GCCGCGCCCG CCCCCGCCTC GGCGCCGGCC GCGCCCGCGC AGCACGCATC GAACTGA
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Protein sequence | MKTFPLSACR TAVAVAVAAL ALAGCANYFG LKSDKAIAPA AQFESARSLP AQGGQWPSLD WANQFGDPQL PKLIDEALEG NPTIAQAQAR IAKASSYIES SRSTLLPKAD AKYSWTRELY SGNALFPPPY GGQWYSENNA LASASWELDL WGKNRARLNA AVSQEKAAEA DLQQARVTLA TSVARTYNQL AQLYALRDIA GREISNRQTV GKITDGRVGA GLDTNVERQT ARGNIATSQS TLSDLDGQIT NVRYQLAALL GKGPDRGLQI AAPVLSAGGA VALPENLPAD LVSRRPDLVA ARWQVEAAMH DVKEAKAEFF PDINLAAGFG FDAFGWGRFL NFASRQAQFG PAIHLPIFDG GALRAQLKGR YADFDLSVAN YNQTLINALN DVATQVASIR SVDTQMGDAQ RALDASTRAY ELAVIRYKAG LSPQLQVLNA DSNRLAAEQT VTNLKMRRRD LQIGLVKALG GGFDAAGTRL AAPAPASAPA APAQHASN
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