Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1678 |
Symbol | |
ID | 4885439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 1652258 |
End bp | 1654042 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640127606 |
Product | RND efflux system, outer membrane lipoprotein, NodT family protein |
Protein accession | YP_001058719 |
Protein GI | 126438904 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGGGA CGCTTGCACT CGCGGTTCTT GCAATCTCAT TAATAATGGC CGGATGCGCA AGCATGGGCG ATGTTGCACC GCAAGACAAG CAGGTCGATC CGGCGTCGCT CGACGCGGGC GCGGCGATCG CGGCGGCCGA GCGCGACGCC GGCTGGCCCG CGGCCGACTG GTGGCGCGCG TATCGCGATC CGCAGCTCGA TTCGTGGATC GCCGCGTCGC TCGCCGGCAA CCCTTCGCTC GCCGCCGCGC AGGCCCGCGT GCGCGAGGCG CAGTCGCTCG CGCGCATCGC GCACGCCGAG GAGCTGCCGC AGTTGAACGG CAACCTGTCG CTGATGCGCC AGCACTGGCC GGACAACGTC TATTACGGCC CGGGCCCGCT CGCGAACGCC GACACGTGGA ACAACACGGG CACGCTGAGC CTGTCGTACC ACCTCGATCT GTGGGGCAAG GACAAGCACA ACGCCGAGCG CGCGCTCGAC GCGGCGCGCG CCCGCGCGGC CGACGCGCGT GCCGCGCAGC TCGAGCTCGA GGCGAACGTC GTGCGCGCGT ACGTCGATTT CGCGAAGAAC TACGCGCTCC TCGACATCGC GCACGCGACC TACGAGCGCC AGAACGCGCT CGCCGAACTG GCGCGCAAGC GCCTGCGCGC GGGCATCGGC ACGCAACTCG AGGTAAGCCA GGCCGAAGCG CCGCTGCCCG ATTATTCGCG GCAGATCGAC TCGTATGAAG AGGCGATCCA GCTCGGCCGT CACCAGCTCG CCGCGCTCGC GGGCAAGGGG CCGGGCGCGG GCGCCTCGCT CGCGCGGCCG AAGCTCGCGC TCGACGCAAA CGCCGCCCTG CCGTCCGCGC TGCCCGCCGA GCTGCTCGGC CGCCGGCCGG ACATCGTCGC CGCGCGCTGG ATGGTCGACG CGCAGGCGCG CGGCATCGAC GTCGCGAAGG CCGCGTTCTA TCCGAACGTC GACCTGATCG CGTCGCTCGG CGGCTTCGCG GTCAGCGCGC CGTTCGCGAC GTTCCTGCGC GCGATGAACG GCGGCTGGTC GGCCGGCCCC GCGCTCACGC TGCCGATCTT CGAGGGCGGC CGGCTGCGCG CGCAACTGGG CGTCGCGTCG GCGGGCTACG ACCAGGCGGT CGAGCACTAC AACCAGACGA TCGTCGGCGC GTTGAAGGAC ATCGCCGACA ACGTCGTGCG CCTGCATTCG CTCGATTCGC AGCAAAAGGA CGCGGCGCGC GCGGTCTCGC TCACGCGGCG CTCGTACGAT CTGTCGCATG CGGGCTTCAG CCGCGGGCTC ACCGATTACG TGAACGTGCT CATCGCGCAG AGCCAGTTGC TGACCGCGCA GGAGAACCAG ACCCGCATCG AGGCCGCGCG CCTCGCCGCG CACGCGTCGC TGATGGTCGC GCTCGGCGGC GGGCTCGAAA CCGGACGCGA CGCGCCGCAC GACGCGCCCG CGGGCGACGC GCGGCGAACG GGTGCTTCGG GTGCTTCGGG TGCTTCGGGT GCTTCGGGTG CTTCAGGCGC TTCAGGCGCT TCAGGCGCTT CAGGCGCTTC AGGCGCTTCA GGCACCGCGG GCGCTTCGGC CACCGCATCC GCGTCGGCCG CCGGCCACGC GCCGGCTGGC GCCGCTGCTC CGGCATCGTC CGCCGGCATC CGCGCGGCCG CCAGCGCTCG CGCGTCAATG CCGGCTCCCG CCGCGGCGGC GACCGCGCCC GCCTTCGCGT CGCCCGTCGC CGGCGCCTCG ACGCCGATGC CCGCTGCGAC AGCGGCGGCC CGCGCCGCCC GCTAA
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Protein sequence | MRGTLALAVL AISLIMAGCA SMGDVAPQDK QVDPASLDAG AAIAAAERDA GWPAADWWRA YRDPQLDSWI AASLAGNPSL AAAQARVREA QSLARIAHAE ELPQLNGNLS LMRQHWPDNV YYGPGPLANA DTWNNTGTLS LSYHLDLWGK DKHNAERALD AARARAADAR AAQLELEANV VRAYVDFAKN YALLDIAHAT YERQNALAEL ARKRLRAGIG TQLEVSQAEA PLPDYSRQID SYEEAIQLGR HQLAALAGKG PGAGASLARP KLALDANAAL PSALPAELLG RRPDIVAARW MVDAQARGID VAKAAFYPNV DLIASLGGFA VSAPFATFLR AMNGGWSAGP ALTLPIFEGG RLRAQLGVAS AGYDQAVEHY NQTIVGALKD IADNVVRLHS LDSQQKDAAR AVSLTRRSYD LSHAGFSRGL TDYVNVLIAQ SQLLTAQENQ TRIEAARLAA HASLMVALGG GLETGRDAPH DAPAGDARRT GASGASGASG ASGASGASGA SGASGASGAS GTAGASATAS ASAAGHAPAG AAAPASSAGI RAAASARASM PAPAAAATAP AFASPVAGAS TPMPAATAAA RAAR
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