Gene BURPS668_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1613 
Symbol 
ID4883518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1575321 
End bp1576160 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content72% 
IMG OID640127541 
Producttype I pilus usher pathway chaperone CsuC 
Protein accessionYP_001058654 
Protein GI126439692 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT CGAGATCGCC CGGCGCGCCG GCGCGCGCGG CAAGGGCGCT GCGCTGCGCG 
CTGCTCGGCG CGGCCGCGGC CGCGCCGTTC GTCGCGCAGC ACGCGCACGC GGCGGCGTCC
GTGATGATCT GGCCGATCGA TCCCGTGATC GAAAGCGGCG ACCGGGCGGC GGCGCTCTGG
CTCGAGAACC GCGATCGCCG GCCGGTGACG CTGCAGGTGC GCGTGCTCGG CTGGCGCGAG
GCGAACGGCG AGGATGTCTA CGACGAGGAT CAGCCGCGCG TGGCCGGCAG CCCGCCGATG
GCGACGGTCG AGCCCGGCAA GCGCCAGTTG ATTCGCCTCA CGCGGCTCGC GGATACGGCG
CCCGGCACCG AGCAGGCGTA TCGCGTGCTG ATCGACGAGA TCCCGCAGCC GGACGACGAC
GCGCAACCCG CCGCGAGCGG GACGTCGCTC GGCGTGAAGT TCCAGATGCA CTACTCGGTG
CCGCTCTTCG TCTACGGCGA CGGCCTGTGG ACGAAAGAGC ACCCGGACAG GCGCCGCGAT
CCGGCGACGG CGGGGCGGCC CGCGCTGCGC TGGCGCGTCG AGCACGACGG CGGCAAGCGT
TGGCTCGTCG TGTCGAATCG CGGCCCCGTG CATGCGCGCA TCACGCACGC GGCGTTCGAA
GCGAGCGGCG CGCGCGCCGA TTTCGCGCGC GGCCTGCTCG GCTACGTGCT GCCCGGCGCG
CGGATGCGCT GGGCGCTGCC CGAGACCCTC AAGCTCCATT CCAATTCCAA GCTGATCGCC
ACGGTCAACG GTGTGGCCGA TCTTGCAATC GACGTGGACG GCGCCGCTTC GAATCGGTAA
 
Protein sequence
MKVSRSPGAP ARAARALRCA LLGAAAAAPF VAQHAHAAAS VMIWPIDPVI ESGDRAAALW 
LENRDRRPVT LQVRVLGWRE ANGEDVYDED QPRVAGSPPM ATVEPGKRQL IRLTRLADTA
PGTEQAYRVL IDEIPQPDDD AQPAASGTSL GVKFQMHYSV PLFVYGDGLW TKEHPDRRRD
PATAGRPALR WRVEHDGGKR WLVVSNRGPV HARITHAAFE ASGARADFAR GLLGYVLPGA
RMRWALPETL KLHSNSKLIA TVNGVADLAI DVDGAASNR