| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1539 |
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| Symbol | |
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| ID | 4883905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | - |
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| Start bp | 1498946 |
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| End bp | 1501738 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640127467 |
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| Product | alpha-amylase family protein |
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| Protein accession | YP_001058580 |
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| Protein GI | 126438912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.604212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGC GCGCGACGCT GCGCCTGCAG TTGCATGCGG GCTTCACGTT CGACGACGCG
GCCGCGCACG TCGGCTATTT CGCGCGGCTC GGCGTGAGCC ATCTGTATCT GTCGCCGATC
ACGGCCGCGG AGCCGGGTTC GCGCCACGGC TACGATGTGA TCGATTATTC GACGGTCAAC
CCCGAGCTCG GCGGCGAGGC GGCGTTCGTG CGGCTGATCG ATGCGTTGCG GCGGCGGGGC
ATGGGCGCGA TCGTCGACAT CGTGCCGAAC CACATGGGCG TGGGCGGCTC GTCCAACCGC
TGGTGGAACG ACGTGCTCGA ATGGGGCGCG CGCAGCCGCT TCGCGCGGCA TTTCGACATC
GACTGGCACG CGAGCGACCC CGCGTTGCAG CGCAAGGTGC TGCTGCCCTG CCTCGGCCGC
CCCTACGGCG AGGCGCTCGC CGCGGGCGAC ATCGCGCTGC GCGCGGACGC CGCGCACGGG
CGGTTCGCGA TCGCATGCGC GGGCCGCACG CTGCCCGTGC AGATCGGCGC GTATCCGGAC
ATCCTGCGCG CGGCGAACCG AAGCGATCTG AACGCGCTCG CCGAGCGCTT CGACGCGCCG
GGCGCGCGGC CGTCGAACCA CGCACGCCTC GACGCGGCGC ACGCGGCGCT GCGCGACTAC
GCCGCCGCGC GCGGGCCGGG CGCGCTCGAC GCGGTGCTGC ACGGCTTCGA TCCGCGCATC
GCGCGCTCGC GCGAGATGCT GCACCGCCTG CTCGAGCAGC AGCATTACCG CCTGGCGTGG
TGGCGCACCG CCACCGACGA AATCAACTGG CGCCGCTTTT TCGACATCTC GACGCTCGCC
TGCATGCGCA TCGAGGACGC AGCCGTGTTC GACGACGTGC ATGCGCTGCT GTGGCGCCTC
TACGCCGCGG GGCTCGTCGA CGGCGTGCGG ATCGATCACG TCGACGGGCT CGCGGATCCG
CGCGGATACT GCCGGCAGTT GCGCGGCCGG CTCGCCGCGT TGCGCGACGG CGAACCGTAT
ATCGTCGTCG AGAAGATCCT CGCGCCCGAC GAACGCTTGC CCGAAGACTG GCGCGTCGAC
GGCACGACAG GCTACGACTT CATGAACGAC GTATCGGCGC TGCTGCACGA CGCCGCCGGC
GCCGCGCCGC TCGCCGCGCT GTGGGCTGAC ATGACGGGCG CCGAGACGAC ATTCGCGCGC
GAAGCGCTGG ACGGCAAGCG CCGCGTGCTC GCCCGGCAGT TCGCGGCCGA GCACGAGCGC
GTCGCGCGTG CGATGCATCG GCTCGCGCGC GCATCGCGCG ACGCCCGCGA CTTCGCGCTC
AATCCGATCC GCCGCGCGGT CGCCGAGCTC GCGATCCGGC TGCCGGTGTA CCGGCTGTAT
CCGTCGGCGG GCGCGCCGCA GCGGACCGAT CGCGCGCTTC TCGCCGGCGC GTGGCAAGCG
GCGCGCAGCG CGATCGCGCC GGCCGATCGC GACGCGCTCG ACTACGTCGC CGCGACGCTC
GGCCTGCCGG GCGTCGCGCG CGCCGTCGCC GGCCTCGGCG ACCCGGCGCG GCTCGCCGCG
CGCGTCGCGT TCGCGCAACT CACCGCGCCG CTCGCCGCGA AAGGCGTCGA GGACACCGCG
TGCTATCGAT ACGGCAGGCT GTTGTCGCGC AACGAAGTCG GCGCGCACGC GGATGCGCTC
TCGCTCGCGC CCGGCGCGTT CCACACGCGC AATCGCCGGC GGCAGCGAAC GTTCCCGGGC
GCGCTGCTCG CCACCGCCAC GCACGACCAC AAGCGCGGCG AAGACGCGCG CGCGCGGCTC
GCGGTCCTGA GCGAAGCGCA TCGCGCGTGG CGCGCGGCGG CGCTCGACTG GGCGGCGTTC
AACGCCCCGC ACCGTCACGG CGCGCCCGCG GCGGCCGACC GGATACCGGG GCCCGCCGCC
GAAGCGATGC TGTATCAGAC GCTCGTCGGC GCGTGGCCGC CCGCGCTCGC GCCCGACGAC
GCGCCCGGCC TCGCCGCGCT GACGGACCGG GTCGAGCGCT GGCAATTGAA GGCGCTGCGC
GAAGCGAAGC GCGACACCGA CTGGCTCGAA CCGAATCTCG GATACGAAGC CGGCTGCGCG
GCGTTCCTGC GCGCGATCAT GACGCCGCGC GGGCCCGACG ATTTCGCTCA TCGGCTGCAC
CGCCTCGTTG CGCGCATCGC GCCCGCGGGC ATCGTCAACA GCCTGTCGCA AGCCGCGCTG
CGGCTGCTGT CGCCCGGCGT GCCGGATCTG TATCAGGGCG CGCAGACATG GGATCACACG
CTCGTCGATC CCGACAATCG CGCCGACGTG CCGTTCGCCC GCTACGCGGC GCAGCGCATC
GACGCGCCCG TCGCCGCGTA TCTGCGCGAC TGGGCCGACG GCCGCGTCAA GCACGCGCTG
ATCGGCAGGC TGCTCGCGTT GCGCGCCGCG CACCCGGAGA CGTTCGCGGC GGGCGCTTAC
GTGCCGCTGC ACGTGCGCGG CACGCGTCGC GGCCATGCGC TGGCGTTCGC GAGACGAGAC
GCGTCGACGA CGATCGTCGT GATCGCGACG CGGCTCGCCT ACCCGCTGCT CGGCGACGCG
CCGGCGCGCC CGTGCGTGGA GGCCGCATGC TGGGCGGACA CGGCGGTCGG GCTCGCGCCC
GGCTTCGCCG GCCCGTGGCG CGACGTGCTG AACGACGGCA CGCTCGACGC GCCGTCGGGC
ATGCTGCCGC TTGCCGCCGC GCTCGCGCAT CTGCCCGTCG CGGTGCTGAT TCGCGAGGGC
GGCGCAGCGG ATACGCCGCG ACGCGGCGCT TGA
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| Protein sequence | MKPRATLRLQ LHAGFTFDDA AAHVGYFARL GVSHLYLSPI TAAEPGSRHG YDVIDYSTVN
PELGGEAAFV RLIDALRRRG MGAIVDIVPN HMGVGGSSNR WWNDVLEWGA RSRFARHFDI
DWHASDPALQ RKVLLPCLGR PYGEALAAGD IALRADAAHG RFAIACAGRT LPVQIGAYPD
ILRAANRSDL NALAERFDAP GARPSNHARL DAAHAALRDY AAARGPGALD AVLHGFDPRI
ARSREMLHRL LEQQHYRLAW WRTATDEINW RRFFDISTLA CMRIEDAAVF DDVHALLWRL
YAAGLVDGVR IDHVDGLADP RGYCRQLRGR LAALRDGEPY IVVEKILAPD ERLPEDWRVD
GTTGYDFMND VSALLHDAAG AAPLAALWAD MTGAETTFAR EALDGKRRVL ARQFAAEHER
VARAMHRLAR ASRDARDFAL NPIRRAVAEL AIRLPVYRLY PSAGAPQRTD RALLAGAWQA
ARSAIAPADR DALDYVAATL GLPGVARAVA GLGDPARLAA RVAFAQLTAP LAAKGVEDTA
CYRYGRLLSR NEVGAHADAL SLAPGAFHTR NRRRQRTFPG ALLATATHDH KRGEDARARL
AVLSEAHRAW RAAALDWAAF NAPHRHGAPA AADRIPGPAA EAMLYQTLVG AWPPALAPDD
APGLAALTDR VERWQLKALR EAKRDTDWLE PNLGYEAGCA AFLRAIMTPR GPDDFAHRLH
RLVARIAPAG IVNSLSQAAL RLLSPGVPDL YQGAQTWDHT LVDPDNRADV PFARYAAQRI
DAPVAAYLRD WADGRVKHAL IGRLLALRAA HPETFAAGAY VPLHVRGTRR GHALAFARRD
ASTTIVVIAT RLAYPLLGDA PARPCVEAAC WADTAVGLAP GFAGPWRDVL NDGTLDAPSG
MLPLAAALAH LPVAVLIREG GAADTPRRGA
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