Gene BURPS668_1482 details

Gene Information

• Locus tag: BURPS668_1482
• Symbol: ftsH
• ID: 4885454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: +
• Start bp: 1445663
• End bp: 1447549
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640127410
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_001058525
• Protein GI: 126439432
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.427373
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACAACA ATATGTTTTC GAAGGCAGCA GTGTGGCTCG TGATCGCACT GGTGCTGTTT 
ACGGTGTTCA AGCAGTTCGA CAAGCCCCGC GTCCAGGAAG GCGTCTCCTA TTCGCAGTTC 
ATGGATGACG CGAAGAACGG CAAGGTCAAG AACGTGGTCG TGCAGGGGCG CAACCTCACC 
GTCACTCCCG CGGATGGTCA GAAGTATCAG ATCGTGTCGC CGGGCGACAT CTGGATGGTC 
GGCGATCTGA TGAAGTACGG CGTGCAAGTC AGCGGCAAGG CCGACGACGA GCCGAACGCG 
CTCGTCTCCG CGCTCTACTA TCTCGGCCCC ACGCTGCTCA TCATCGTGTT CTGGTTCTAC 
ATGATGAGAC AGATGCAGGG CGGCGGTAAG GGCGGCGCGT TCTCGTTCGG CAAATCGCGC 
GCGCGGCTGA TCGACGAGAA CAACAACGCG GTCAACTTCT CCGACGTCGC CGGCTGCGAC 
GAAGCGAAGG AGGAAGTGTC CGAGCTCGTC GATTTCCTGC GCGATCCCCA GAAATTCCAG 
AAGCTCGGCG GCCGCATCCC GCGCGGCGTG CTGCTCGTCG GGCCTCCCGG CACCGGTAAG 
ACGCTGCTTG CCCGCGCGAT CGCGGGTGAG GCGAAGGTGC CGTTCTTCAG CATCTCGGGC 
TCGGACTTCG TCGAAATGTT CGTCGGTGTC GGCGCGGCGC GTGTGCGCGA CATGTTCGAG 
CAGGCGAAAA AGCATGCGCC TTGCATCGTG TTCATCGACG AAATCGACGC GGTCGGCCGT 
CATCGCGGCG CCGGCATGGG CGGCGGCAAC GACGAGCGCG AGCAGACGCT GAACCAGATG 
CTCGTCGAGA TGGACGGCTT CGAGGCGAAC TCCGGCGTGA TCGTGATCGC CGCGACGAAC 
CGCTCCGACG TGCTCGACAA GGCGCTGCTG CGTCCTGGCC GTTTCGATCG CCAGGTCTAC 
GTCGGCCTGC CTGACATCCG CGGCCGCGAG CAGATCATGC GCGTGCACCT GCGCAAGGTG 
CCGATCGCGA ACGACGTCGA CGCGGCGGTC ATCGCGCGCG GCACGCCGGG CTTCTCGGGC 
GCCGATCTCG CGAATCTCGT CAACGAGGCG GCGCTCTTCG CGGCGCGGCG CGGCAAGCGA 
ATCGTCGAGA TGCAGGATTT CGAGGACGCG AAGGACAAGA TCTTCATGGG GCCGGAGCGC 
AAGTCGGCGG TGATCCGCGA GGAAGCGAAG CGCGCGACCG CCTACCACGA GTCGGGCCAT 
GCGGTGATCG CGAAGCTGCT GCCGAAGGCC GATCCGGTCC ACAAGGTCAC GATCATTCCG 
CGCGGCCGCG CGCTCGGCGT CACGTGGCAG TTGCCCGAGC ACGACAACGA GACGTATTCG 
AAGGATTACC TGCTCGACCG CCTCGCGATC CTGTTCGGCG GCCGGGTGGC CGAAGAGCTG 
TTCCTGAATC TCGTGAGCAC CGGCGCGTCG GACGATTTCA ACAAGGCGAC GCAGACGGCG 
CGCGCGATGG TCGCGCGCTT CGGCATGACC GATGCGCTCG GGCCGATGGT CTACGTCGAC 
GACGAGAACG ACGGCGGCCC GTTCGGGCGC GGCTTCACGC GCACGATCTC GGAGGCGACG 
CAGCAGAAGG TCGACGCGGA AATCCGCCGC GTGCTCGACG AACAGTACGG CCTCGCCCGC 
CGGCTGCTCG AGGAGAATCG AGACAAGGTC GAGGCGATGA CGGCCGCGCT GATGGAGTGG 
GAAACGATCG ACGCCGACCA GATCAACGAC ATCATGGAAG GGCGTCCGCC GCGTTCGCCG 
AAGAGCGTGC CGCCGGCCGG CGATCCTTCG TCGGGCGGTT CGTCCGGCGC CGAAGTCAAG 
CCGGGCAACG CCACCGCGCC GGCATAA 

 

Protein sequence

MNNNMFSKAA VWLVIALVLF TVFKQFDKPR VQEGVSYSQF MDDAKNGKVK NVVVQGRNLT 
VTPADGQKYQ IVSPGDIWMV GDLMKYGVQV SGKADDEPNA LVSALYYLGP TLLIIVFWFY 
MMRQMQGGGK GGAFSFGKSR ARLIDENNNA VNFSDVAGCD EAKEEVSELV DFLRDPQKFQ 
KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE 
QAKKHAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN 
RSDVLDKALL RPGRFDRQVY VGLPDIRGRE QIMRVHLRKV PIANDVDAAV IARGTPGFSG 
ADLANLVNEA ALFAARRGKR IVEMQDFEDA KDKIFMGPER KSAVIREEAK RATAYHESGH 
AVIAKLLPKA DPVHKVTIIP RGRALGVTWQ LPEHDNETYS KDYLLDRLAI LFGGRVAEEL 
FLNLVSTGAS DDFNKATQTA RAMVARFGMT DALGPMVYVD DENDGGPFGR GFTRTISEAT 
QQKVDAEIRR VLDEQYGLAR RLLEENRDKV EAMTAALMEW ETIDADQIND IMEGRPPRSP 
KSVPPAGDPS SGGSSGAEVK PGNATAPA