| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1404 |
|---|
| Symbol | |
|---|
| ID | 4881806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 1373574 |
|---|
| End bp | 1374770 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640127332 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_001058447 |
|---|
| Protein GI | 126442269 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCGC AGCCTCGCCA CTCCGCCGGC ACGCCCGGCC ACTATTCACG CAGCCTGTTG
CTGCTGCTCG CGACGATCGC CGGCGTCTCC GTCGCGAATA TCTATTACAA CCAGCCGCTG
CTCGACGCAT TCCGCGCATC GTTCCCGGGC AGCGCGTCAT GGATCGGCGT CGTGCCGACC
GCGACGCAGC TCGGCTACGC AACCGGCATG CTCGTCCTCG CGCCGCTCGG CGACCGCTTC
GACCGGCGCA CGCTGATCCT GCTGCAGATC GCCGGGCTGT CGGCCGCGCT CGTCGTCGCG
GCGGCCGCGC CGACGCTCGG CGTGCTCGCC GCGGCAAGCC TCGCGATCGG CATCCTCGCG
ACGATCGCGC AGCAGGCGGT GCCGTTCGCC GCCGAGATCG CGCCGCCCGC CGCGCGCGGG
CAGGCGGTCG GCACCGTGAT GAGCGGCCTG CTGCTCGGCA TCCTGCTCGC GCGCACGGCG
GCGGGCTTCG TCGCCGAATA CTTCGGCTGG CGCGCGGTGT TCGCCGTATC GGTCGCGGCG
CTCGCCGCGC TCGCGGCCGT GATCGTCGCG CGCCTGCCGC GCAGCTCGCC GACATCGACG
CTGCCGTACG GCAAGCTGCT CGCATCGATG TGGCAGCTCG TGCGCGAGTT GCGCGGACTG
CGCGAGGCGT CGATGACGGG CGGCGCGATC TTCGCCGCGT TCAGCGCGTT CTGGCCGGTG
CTCACGCTGC TGCTCGCGGG CGCGCCGTTT CATCTGGGCC CGCAGGCGGC GGGGCTCTTC
GGGATCGTCG GCGCGGCGGG CGCGCTCGCC GCGCCGTACG CGGGCCGCTT CGCCGACAAG
CGCGGCCCGC GCGCGATCAT CTCGCTCGCG ATCGCGCTGA TCGCCGCGTC GTTCGCGATC
TTCGCGCTGT CGGGCGCGAG CCTCATCGGG CTCGTGATCG GCGTGATCGT GCTCGACGTC
GGCGTGCAGG CCGCGCAGAT CTCGAACCAG TCGCGCATCT ACGCGCTGAA GCCGGACGCG
CGCAGCCGCG TGAACACGGT GTTCATGGTC TGCTACTTCA TCGGCGGCGC GATCGGCTCG
TCCGCGGGCG TCGCCGCATG GCGCGCGACG GGCTGGCTCG GCATGTGCGC GGTCGGCCTG
CTGTTCTCGA TCGTCGCGGC GATCGTGCAT TTCCGCGGCG GCGCGGGCGC GCGATAA
|
|---|
| Protein sequence | MSSQPRHSAG TPGHYSRSLL LLLATIAGVS VANIYYNQPL LDAFRASFPG SASWIGVVPT
ATQLGYATGM LVLAPLGDRF DRRTLILLQI AGLSAALVVA AAAPTLGVLA AASLAIGILA
TIAQQAVPFA AEIAPPAARG QAVGTVMSGL LLGILLARTA AGFVAEYFGW RAVFAVSVAA
LAALAAVIVA RLPRSSPTST LPYGKLLASM WQLVRELRGL REASMTGGAI FAAFSAFWPV
LTLLLAGAPF HLGPQAAGLF GIVGAAGALA APYAGRFADK RGPRAIISLA IALIAASFAI
FALSGASLIG LVIGVIVLDV GVQAAQISNQ SRIYALKPDA RSRVNTVFMV CYFIGGAIGS
SAGVAAWRAT GWLGMCAVGL LFSIVAAIVH FRGGAGAR
|
|---|
| |