Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1125 |
Symbol | |
ID | 4882101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 1102625 |
End bp | 1104382 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640127053 |
Product | hemolysin activation/secretion protein |
Protein accession | YP_001058175 |
Protein GI | 284159912 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000467799 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTC GTTCGTCCGC CGTCCTACTG TCGATTGCCT CCCTTGTGCC ATTGGTAGGA TATACACAGC AGGTACCGTC CCCTGCCGAC CAAGCCGCAG CCGCGCGCGC CAATGCGGAA CAGGACCGGC AGGCGCAGCA GCAACGAGAT GCGCAGCAGC GCGATGCGGC CGTGCGTGCC CCGTCCGTGC GCTCCGAGGT GCCGAAGGTC GAAGCGTACC CGGCGCTCCC GGCGGAAGCA CCATGCTTTC GTATCGATCG CTTTACGCTC GACGTACCCA ACTCCTTGCC CGACACGACG AAGGCACAGG GGGCGTCCGC CCTCCCGATG GATCGCTTCG CGTTCGCCCG TGCCTGGCTG AACCACTACG CCGGCCAATG CGTCGGCAAG CAAGGCGTTG ACGTGCTGGT CAAAGAGCTC TCTCAAGCGA TTCTGGCGCG CGGCTACGTC ACCACACGCG TGCTCGTCCC CGAGCAAGAC CTGTCGGCCG GCACGCTGAA ATTCTCGCTG ATTCCCGGCG TGATTCGCCA TGTGCGCTTC GCCGACGAAA AACTGCGCGG CACATGGAAG ACCGCGTTCC CGACCGGTGA CGGCGAAGTG CTGAACCTGC GCGACCTCGA ACAAGGCCTT GAGCAGATGA AGCGCGTGAC GAGCCAGGAT GTCTCGATGC AGATTGTTCC CGGCGAGCTG CCCGGTGAAA GCGATGTCGT GCTCGATGTG AAGCGCAGCA AGCCGTGGAC CGTCGTCGCA TCGATCGACA ATTCTGGCAC ACGCGCTACG GGCAAGCTGC AAGGCAACCT GTCGGTCGGC GTCGACAATC CGCTTGGCCT GAACGACATG CTCAACGTTG GCGTCAGCCA AGACCTCGAA TTCGGCGACA AGCGCCTCGG CTCGCACGGC TGGAACGGCT TCTATTCGAT TCCGTGGGGT TACTGGACTG CCACGCTGTC CGCATACACG AACACCTACT ATCAGCAGAT TGCGGGTGTG AACCAGACAT TCATCGCGAG CGGCAACTCG AAGACAGTCG ATCTCAAACT GGCTCGGGTG CTGGCGCGCA GCCAGAACGA CGTGCTCGGA GGGTATTTCC GGCTGTCCCG CCGTTTCGGC GAGAGCTTTA TCGAGGACAC TGAGATTTCG CAACAGCGTC GTAACAACAC GATCATCGAA CTCGGTTTGA CCGACCGGCA CTACTTCGAC GGCGCGCAAT TCGACGGCTC GCTCGCATAT CGTCAAGGTG TCGGCGGATT CGGCGCGCAG GACGACACAC TGGCGGCGAG CGGCTCGACC TATCGCTTCA AGATGGCCGT GCTCGACGCG AACCTCTCGG TGCCGTTTGC AATCGGCGAA CAACCGTTCC GCTACGTTGG AACGTTCCAC GGCCAGTACA CCGGAAACAC GCTCTACTAC CTCGATGACC TGACGATCGG CAGCCGATAT ACCGTGCGCG GCTTCGACGG AGAAACGATG CTGGCGGCGT CGCGCGGGTT CTACTGGCGT AACGAGTTGC AAATGCAGAT TGGCCAGACG AGGCAAGCGG TGTATGCAGG GCTGGATTAC GGGCGCGTGT GGGGGCCTCA GCCGATTGCG CTCGTCGGTA CGCAGTTGGC CGGCGCCGTC ATCGGTATGA AGGGAAGCAT CGGGACGCGC TTCGGTGCCT ACGCGTATGA CCTGTTTGCA GGCACGCCTG TCTATAAGCC GTCCGGCTTT CCAACTGCGC GTGTCACCGT CGGATTCCAA CTGACTTCGC AGTTTTGA
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Protein sequence | MRIRSSAVLL SIASLVPLVG YTQQVPSPAD QAAAARANAE QDRQAQQQRD AQQRDAAVRA PSVRSEVPKV EAYPALPAEA PCFRIDRFTL DVPNSLPDTT KAQGASALPM DRFAFARAWL NHYAGQCVGK QGVDVLVKEL SQAILARGYV TTRVLVPEQD LSAGTLKFSL IPGVIRHVRF ADEKLRGTWK TAFPTGDGEV LNLRDLEQGL EQMKRVTSQD VSMQIVPGEL PGESDVVLDV KRSKPWTVVA SIDNSGTRAT GKLQGNLSVG VDNPLGLNDM LNVGVSQDLE FGDKRLGSHG WNGFYSIPWG YWTATLSAYT NTYYQQIAGV NQTFIASGNS KTVDLKLARV LARSQNDVLG GYFRLSRRFG ESFIEDTEIS QQRRNNTIIE LGLTDRHYFD GAQFDGSLAY RQGVGGFGAQ DDTLAASGST YRFKMAVLDA NLSVPFAIGE QPFRYVGTFH GQYTGNTLYY LDDLTIGSRY TVRGFDGETM LAASRGFYWR NELQMQIGQT RQAVYAGLDY GRVWGPQPIA LVGTQLAGAV IGMKGSIGTR FGAYAYDLFA GTPVYKPSGF PTARVTVGFQ LTSQF
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