Gene BURPS668_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1054 
Symbol 
ID4885557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1029351 
End bp1029998 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID640126982 
ProductompA family protein 
Protein accessionYP_001058104 
Protein GI126440263 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCA AAATCGCGAC GCGCTTGTCC GTTTTCGCTC TCGCCGGCGC CCTGCTGGCG 
GGTTGCGCAA CCCAGCAAGG CACCAACACG GCTGTCGGCA CCGGCACGGG CGCCGCGCTC
GGCGCGGGCA TCGGCGCGCT CGCTGGCGGC GGCAAGGGCG CGGCGATCGG CGCCGGCGTC
GGCGCGCTCG TCGGCGGCGT GACGGGTTAC AACTGGCAAG CGATCAAGAA CAAGCTCGCG
CCGTCGGCGC AGCAAACGGG CACGCAGGTC ACCGAACAGC CGGACGGCTC GCTCAAGCTG
AACGTGCCCA GCTCGGTCAC GTTCGCGACC GACCAGTACG CGATCACGCC GGCGTTCACG
CCGCTGCTGA ACGACCTCGC GACGACGCTG AACCAGAACC CGCAGATCAC CGCGTCGGTC
GTCGGCTACA CCGACAGCAC GGGCTCGGCC GCGCACAATC AGACGCTGTC GCAAAATCGC
GCGCAAAGCG TCGTGAACGC GCTCGCGCAG CGCGGCGTCG CGGCGAACCG CCTGTCCGCG
CAAGGCATGG GCGCGTCGAA CCCGATCGCC GACAACGCAA CGGAAGCCGG CCGCGCGCAA
AACCGCCGCG TCGAGATCTA CCTGCGCGCG CCGCAAGCGG CGCAGTAA
 
Protein sequence
MNTKIATRLS VFALAGALLA GCATQQGTNT AVGTGTGAAL GAGIGALAGG GKGAAIGAGV 
GALVGGVTGY NWQAIKNKLA PSAQQTGTQV TEQPDGSLKL NVPSSVTFAT DQYAITPAFT
PLLNDLATTL NQNPQITASV VGYTDSTGSA AHNQTLSQNR AQSVVNALAQ RGVAANRLSA
QGMGASNPIA DNATEAGRAQ NRRVEIYLRA PQAAQ