| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0770 |
|---|
| Symbol | |
|---|
| ID | 4882530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 748084 |
|---|
| End bp | 750972 |
|---|
| Gene Length | 2889 bp |
|---|
| Protein Length | 962 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640126698 |
|---|
| Product | cytochrome c oxidase, subunit I/subunit III |
|---|
| Protein accession | YP_001057822 |
|---|
| Protein GI | 126442084 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0306921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CCGACACCGA TCGCCGCGCC CGCCTCGCCT ACCGCCGCGC GCCGGAGATC
GGCGAAGCGG GCCCGGGCTC GGCCGCCGAG CGGCGGCTCG CGGCGCTGTG GGAAAGCCGC
CCCGGCTGGC GGGGCTGGCT CGCGACGGTC GACCACAAGC GCATCGGGCT GCGCTACATC
GTCACCGCGT TCGCGTTCCT GCTCGCGGGC GGCGCCGAGG CGCTCGTGAT GCGCATCCAG
CTCGCGCAGC CCAACGGCAC GCTGCTGAAC CCCGAGCAAT ACAATCAGCT GTTCACGATG
CACGGCGTGA CGATGATCTT CCTGTACGCG CTGCCCGTGC TGTCCGGCTT CGCGAACTAT
CTGTGGCCGC TGATGCTCGG CTCGCGCGAC ATGGCGTTTC CGCGCCTGAA CGCGTTCTCG
TACTGGGTGT TCGTCGCGGC GGGGGCGTTC CTCTACGCGA GCTTTCCGTT GGGCGAAGCG
CCGAACGGCG GCTGGTTCAA CTACGTGCCG CTCACGACGC TCGACTACAG CCGCGGCCCG
AACATCGACG TCTACGCGCT CGGCATGATC CTGCTCGGCG TCTCGACGAC GGTGGGCGCG
GCGAACTTCG TCGTCACGCT GCTGCGCATG CGCGCGCCCG GCATGTCGAT CGACCGGCTG
CCGATCATCG TCTGGGGCAC GCTCACCGCG TCGTTCGCGA ACCTGTTCGC GGTGCCCGCC
GTGAGCCTCG CGTTCCTGCT GCTCTGGCTC GATCGCAACG TCGGCACGCA TTTCTTCGAC
GTCGCGGCGG GCGGCCGCCC GCTGCTGTGG CAGCACCTGT TCTGGATGTT CGCGCACCCG
TGGGTCTACG TGGTCGTGCT GCCCGCGATG GGCATCGTGT CCGACGCGAT GCCGACGTTC
TGCCGGCGCC CGCTCGTCGC GTACGCGGCC GTCGCGGTAT CGACGGTCGC GACGATGCTG
ATCGGCTTCG AGGTGTGGGT CCATCACATG TTCGCCACCG GCATCGCGCC GCTCGCGCTC
GCGTTCTTCG GCGCGGCGAG CATGCTGATC TCGGTGCCGA GCGCGGTTGC GGTGTTCGCA
TGGCTCGCGA CGATCTGGAC GGGCCGCCCG GTGTTCAAGA CGCCGTTCCT CTATTTCGCG
GGCTTCGTGC TGATGTTCGT GATCGGCGGC GTGTCCGGCG TGATGACGGC CGCGGTGCCG
CTCGACTGGC AATTGACCGA GACGTACTTC ATCGTCGCGC ATCTGCACTA CGTGCTGCTC
GGCATCAACG TGTTTCCGGT GCTCGGCGGC ATCGCGTACT GGTTTCCGAA GTTCACCGGC
CGGATGATGA ACGAGCGATT CGGCAAGCTC ACGTTCTTCG TGATCCTGAT CGGTTTCAAC
GTGGGCTTCT TTCCGATGCA TCTGTCCGGC CTCTTCGGGA TGCCGCGGCG GATCTACACG
TATCCGCCCG GCATGGGATG GGACACGACG AATCTCGTGA CGAGCCTCGG CTCGTTCGTG
CTCGGCGCGG GCGTGCTGAT GTTCGTCGGC CACGCGCTGT GGAGCATGAA GCGCGGCGCG
CGCGCGAGCG CCGATCCGTG GGGCGCGGCC GGCCTCGAAT GGTCGGTGAG CTCGCCCGCG
CCCGCGTACA ACTTCGCCGC GCTGCCGATC GTCGCGTCGC GCCATCCGCT GTGGGAGGCG
CAACTCGCGC CGCACGCGCG CCGCTCGAGC CTGCGGCGCG GCTATCTGCT CGCCGACGGA
CGCGAGGCGC TCGGCGTCAC GCCGCTGTCC GGCAGGCCGG ACGTGATCCT GAAAATGCCC
GACGACACGT CCTCGCCGCT CGCGCTCGCG CTCTTTGCGA CGCTCGCGTG CGCGGGGCTC
GCGCTTCGCT CGCCGGGCAT CGTCGCGGCG GGCGCGCTCG GCTGCGCGGC CGCGATGCTC
GCATGGCTAT GGCCGCGGCG CTCGCTCGGG CAGCGCGAGC CGCCGCTCGC TGCGGCGGCG
CCGGCGCGCG CGCCGAACGG CACGGATGTC GCGCACACGG CGCACGCCGA CGGCGGGGAA
CATACGGGAC GCGCGGCTGT CGCGAACGCG ACGAACGCGA CGAACGCGAC GAACGCGACG
AACGCGACGA ACGCGACGAA CGCGACGAAC GCGACGAACG CGACGAACGC GACGAACGCG
ACGAACGCGA CGAACGCGAC GAACGCGACG AACGCGACGA ACGCGACGAA CGCGACGAAC
GCGACGAACG CGACGAACGC GACGAACGCG ACGAACGCCG CGAACGCCGC GAACGCCGCG
GGCGCCACAT GCGCGGCGTA CGCGCGCGAG CTGCCCGTCG GCAGCGCGGG CGAACACGCG
GGGGGCTGGT GGGGCATGGC CACGCTGATC GCGACCGAGG CGGCGCTGTT CGGCTATCTG
ATCTTCAGCT ACTTCTACCT GCAAAGCCAG ACACCTGAGC GATGGCCGCC GGAAGGGCTG
CCGAAGCTCG CGCTCGCGTC GTTCAACACC GCGGTGCTCG TGTCGAGCAG CGTGTTCGTC
TGGCTCGCCG ACCGGCTCGT CGCGCGCCGG CGCCCGCGCG CGGCGAGCGT CGCGCTCGCC
GTGGCGATCG CGCTCGGCGC CGCGTTCGCG CTGATCCAAT GGCACGAGTG GCGCGGCCAT
CCGTACGGAA TGACCGCGCA TCTGTACGGC TCGCTGTATT TCACGATCAC GGGCTTTCAC
CTCGCGCACG TCGTCGTGGG GCTCGCCGTG CTCGCGGCGC TCGCCTTCTG GACGATGCGC
GGCTACTTCG ACGACAGGCG GCGCGCGGCG CTGTCGATCG GCGGGCTCTA CTGGCACTTC
GTCGACATCG TCTGGCTCTT CATCTTCACG ACGCTCTACC TCACGCCGAT CTGGCTCAGG
GGGCGATGA
|
|---|
| Protein sequence | MSTADTDRRA RLAYRRAPEI GEAGPGSAAE RRLAALWESR PGWRGWLATV DHKRIGLRYI
VTAFAFLLAG GAEALVMRIQ LAQPNGTLLN PEQYNQLFTM HGVTMIFLYA LPVLSGFANY
LWPLMLGSRD MAFPRLNAFS YWVFVAAGAF LYASFPLGEA PNGGWFNYVP LTTLDYSRGP
NIDVYALGMI LLGVSTTVGA ANFVVTLLRM RAPGMSIDRL PIIVWGTLTA SFANLFAVPA
VSLAFLLLWL DRNVGTHFFD VAAGGRPLLW QHLFWMFAHP WVYVVVLPAM GIVSDAMPTF
CRRPLVAYAA VAVSTVATML IGFEVWVHHM FATGIAPLAL AFFGAASMLI SVPSAVAVFA
WLATIWTGRP VFKTPFLYFA GFVLMFVIGG VSGVMTAAVP LDWQLTETYF IVAHLHYVLL
GINVFPVLGG IAYWFPKFTG RMMNERFGKL TFFVILIGFN VGFFPMHLSG LFGMPRRIYT
YPPGMGWDTT NLVTSLGSFV LGAGVLMFVG HALWSMKRGA RASADPWGAA GLEWSVSSPA
PAYNFAALPI VASRHPLWEA QLAPHARRSS LRRGYLLADG REALGVTPLS GRPDVILKMP
DDTSSPLALA LFATLACAGL ALRSPGIVAA GALGCAAAML AWLWPRRSLG QREPPLAAAA
PARAPNGTDV AHTAHADGGE HTGRAAVANA TNATNATNAT NATNATNATN ATNATNATNA
TNATNATNAT NATNATNATN ATNATNATNA TNAANAANAA GATCAAYARE LPVGSAGEHA
GGWWGMATLI ATEAALFGYL IFSYFYLQSQ TPERWPPEGL PKLALASFNT AVLVSSSVFV
WLADRLVARR RPRAASVALA VAIALGAAFA LIQWHEWRGH PYGMTAHLYG SLYFTITGFH
LAHVVVGLAV LAALAFWTMR GYFDDRRRAA LSIGGLYWHF VDIVWLFIFT TLYLTPIWLR
GR
|
|---|
| |