| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0626 |
|---|
| Symbol | |
|---|
| ID | 4883793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 596796 |
|---|
| End bp | 599159 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640126554 |
|---|
| Product | EAL/GGDEF domain-containing protein |
|---|
| Protein accession | YP_001057678 |
|---|
| Protein GI | 126441257 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTTCGG CCGTCGCGGT TGCACTGGCG GTTGCGTTGC TCGGCGCGGC GCTGCTGTCC
GTCGAGCGGT TCGGCGCCGC GCGAAGCCGC GCGTCGGCCG CGATCCCGGC GAGCATCGGC
GCGCGCCTGA GCGGCTGCGC GTTCATCGCC GTGCGCATCG GCGCGGCGCT GTCGCGGCGC
GTGCCGTCGC CGGCGCATGC GGCGGCGCCT GGCGTTGCGC GGCCGGATTT CGACGCGATC
GAGCGCGTGT TCGGCCCGAT CCGCATGCGC GAGCGGCGCG CACATGGCGC GACGTGCACC
GCGGACGCGC CGGACGCGTC GCACGCAGGG TGGATCGAAC CCGCGCGCGC GTGCTCGGCC
GCCGCGCATG CGGCGCCGGG GCGCGGCGCC GAGGGCGCGC CGAACACGAT GCCGAGGCCG
TCCGAAGCGG GCGCCGCGGC GGTCCCACAA TCGCAACCGT ACCTGGACAT GATCGATTCG
ACGTTTCGCG AACCGGCGGC CATCGTGCTC GCTTTGAGCC TGCTCGGCAT GATCGCGCTC
GCACTGCTGC CCGTGTTCCG GATCAGGCGG CTCGCGCTTC GCCTCGGCGA GGCGCAGGGA
GCGCTCGAGA TGAGCGAAGC GCGCGCCCGC GCGGCGCTCG TCGCCGTCGG CGACGGCGTG
ATCTTCACCG GCCGGGCGGG GCGCGTCGAA TGCCTGAATC CGGCGGCGGA GCGATTGATC
GGCATGCTCG CCGACGATTG CCGCGGCCGT CCGCTCGTGT CGACACTGCG GCTGTCGCGC
ACGGCCACGT CCGCTTCGTC CGGCGCGTTC GCCGCGCCCG CCGGGCTCGA CGCGCCGGAT
TCGCCGGGCT CGGCCGCCTC GCCCGACGCG CCGCTCGGCG ATCTCGAGGA CGGCGGCAGT
TGCGACGCGA CGCTCTACCG CGCGGACGGC GGCGCGATCG CCGTGCGCGC GACCGCGTCG
TCGATCGCGC CGCCGCCGGG GCATGCGCGG CGCGCGTGCG GCAGCGGCCG CGTGCTCGTG
CTCAAGAGCC TCGCGACCGA GCACGAGCTC GTGCGCCGCC TCGCGTGGCA GACAACGCAC
GATCCGCTCA CCGGCCTGGC GAGCCGCGCA GAGTTCGAGC GTCACGTTGG TTTCGCGCTC
GCCGCCGACG TGCGCGAGCC GGTCGCGCTG CTGTTCGTCG ATCTGGATCG CTTCCGGATC
GTCAACGATA CGTGCGGCTA CGCGGCGGGC GACGCGATGC TCGCCGCGCT CGCCGCGCGT
CTCGTGTCGT GCGCGGCGTC GGCCGACGTC GTCGCGCGGC TCGGCGGCGA CGAATTCTGC
GTGCTGCTCG ACGCCCGCGA CGAAGCGTCG GCCGTGAGCG CGGCCGAGCG CCTGCGCGCG
AGCGTCGACG GCTTCGTGTT CGTCTGGGAC GGCCAGCCGT TCTCGGTGAC GGCGAGCGTC
GGCGTCGCGC TGCTCGGCGG GCCGGGCCGC GCGCCGCGCG TCGAGGATGC GGTGCGGCTC
GCCGGCATCG CGTGCGACGT CGCGAAGGCG CGCGGGCGCA ACCGCGTGCA ACTGGCCGAT
CCGCACGATC ACGAGCTCGC GCACCACATC AGCGACGTAT CGTGGTGCGC GCGCGTGAGG
CAGGCGCTCG AATACGACGA TTTCCGCCTG TACGTGCAGC CGATCGTCGA TACGGCGACG
CAGGGTGCGA CCGGCCTGCC GCGCGCGAGG CGCGGCGAGC TGCTGCTGCG CATGGGCGCG
CTCGGCGAGC GCGAGGGCGT CGCGCCGCCC GGCCTTTTCA TCCGCGCGGC CGAGCGCTAC
GGGCTCGTCA CCGACATCGA CCGCTGGGTC GTGCGCACGG TGCTCGACGC GCTCGCGCGC
ACGCGCAGCC GGCGCTTCAG CGAATACGCG ATCAATCTGT CGGGGATCTC GATCGGCGAC
GAGCGCTTTC TCGACTATGT GCTCGAACAG TTCGCGCGCA CGCGCGTCGC GCCCGCGCTC
ATCTGTTTCG AGATCACCGA GACGGCGGCG ATCGCGAACC TGGCCGGCGC GCTGCGCTTC
ATGCACGAGC TGAAGGCGCT CGGCTGCCGG TTCGCGCTCG ACGATTTCGG CTCCGGGATG
GCGTCGCTCA GCTATCTGAA GCAACTGCCC GTCGAGTACC TGAAGATCGA CGGTAGCTTC
GTGACGGGCA TCGCGAACGA TGCCGCGAGC CTCGACATCG TCGCGTCGAT CAACGACATC
GGGCACGCGA TGAATTGCAA GACGATCGCC GAGTACGTCG ACAGCGCGGC GACGCTGCAA
AAACTCGCCG CGCTCGGCGT CGATTATGCG CAGGGCTACT ACATCGGCCG GCCCGTGCCG
TGGTGCGAGG CCGCGTGCGC GTAG
|
|---|
| Protein sequence | MRSAVAVALA VALLGAALLS VERFGAARSR ASAAIPASIG ARLSGCAFIA VRIGAALSRR
VPSPAHAAAP GVARPDFDAI ERVFGPIRMR ERRAHGATCT ADAPDASHAG WIEPARACSA
AAHAAPGRGA EGAPNTMPRP SEAGAAAVPQ SQPYLDMIDS TFREPAAIVL ALSLLGMIAL
ALLPVFRIRR LALRLGEAQG ALEMSEARAR AALVAVGDGV IFTGRAGRVE CLNPAAERLI
GMLADDCRGR PLVSTLRLSR TATSASSGAF AAPAGLDAPD SPGSAASPDA PLGDLEDGGS
CDATLYRADG GAIAVRATAS SIAPPPGHAR RACGSGRVLV LKSLATEHEL VRRLAWQTTH
DPLTGLASRA EFERHVGFAL AADVREPVAL LFVDLDRFRI VNDTCGYAAG DAMLAALAAR
LVSCAASADV VARLGGDEFC VLLDARDEAS AVSAAERLRA SVDGFVFVWD GQPFSVTASV
GVALLGGPGR APRVEDAVRL AGIACDVAKA RGRNRVQLAD PHDHELAHHI SDVSWCARVR
QALEYDDFRL YVQPIVDTAT QGATGLPRAR RGELLLRMGA LGEREGVAPP GLFIRAAERY
GLVTDIDRWV VRTVLDALAR TRSRRFSEYA INLSGISIGD ERFLDYVLEQ FARTRVAPAL
ICFEITETAA IANLAGALRF MHELKALGCR FALDDFGSGM ASLSYLKQLP VEYLKIDGSF
VTGIANDAAS LDIVASINDI GHAMNCKTIA EYVDSAATLQ KLAALGVDYA QGYYIGRPVP
WCEAACA
|
|---|
| |