Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0558 |
Symbol | nirB |
ID | 4882349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 529966 |
End bp | 532410 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640126486 |
Product | nitrite reductase [NAD(P)H], large subunit |
Protein accession | YP_001057611 |
Protein GI | 126439505 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.840641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGAAAA TGAAGCTGGT GATGGTCGGC AACGGCATGG CCGGAGTGCG CACGCTCGAA GAATTGTTCA AGCTCGCGCC CGATTTGTAC GACGTGACGG TATTCGGCGC CGAACCGCAT CCGAACTACA ACCGGATCCT GCTGTCGCCC GTGCTCGCCG GCGAGCAGAC GCTCGAGCAG ATCGTCCTCA ACGATTACGC ATGGTACGCA TCGCACGGCG TCACGCTCCA CGTCGGCAAG AAGATTGTGA AGATCGATCG CGTGAAGCGC GTCGTGATCG CCGACGACGG CACCGAGGCC GCATACGACC GGCTGCTGCT CGCGACCGGC TCGAACCCGT TCATGCTGCC CGTTCCGGGC GCGCAGCTCG ACGGCGTGCT CGGCTATCGC GACATCGCGG ACACGCAGGC GATGATCGAC GCCGCCGCGC GGCACACGCA CGCGGTCGTG ATCGGCGGCG GCCTGCTCGG CCTCGAGGCG GCGAACGGCC TGAAGCTGCG CGGCATGGAC GTGACGGTCG TGCACCTCGC GCCGACGCTG CTCGAGCGCC AGCTCGACGC GAAGGCGGGC GGCCTGTTGC GTGCGTCGCT GGAGGCGCGC GGGCTGACGT TTCTGATGCC GAAGCAAACG CAGGCGCTCG TCGGCGACGA GCACGGCCGC GTGCGCGCGG TGCACTTCAA GGACGGCGGC GAATGCAAGG CCGACCTCGT CGTGATGGCG GTCGGCATTC GCCCGAACAC GGCGCTCGCC GAAAGCGCGG GCCTCTATTG CAATCGCGGG ATCGTCGTCA ACGACACGAT GCAGACCTAC GATCCGCGCA TCTACGCGGT CGGCGAATGC GTGAGCCACC GCGGTATCGC GTACGGCCTC GTCGCGCCGC TGTTCGAACA GGCGAAAGTC GCGGCGAACC ATCTCGCGCA GTTCGGCATC GGCCGCTACA CGGGCTCGGT GACGTCGACG AAGCTCAAGG TCACCGGCAT CGACCTGTTC TCCGCGGGCG ACTTCCTCGG CGGCGACGAT ACCGAAGACA TCACGCTGTC CGATCCGATC GCGGGCGTCT ACAAGAAGCT CGTGATCAAG GACGACAGGA TCGTCGGCGC GTGCCTGTAC GGCGACACGG CCGACGGCGC GTGGTATTTC AAGCTGCTGC GCGAAGGCCG CAACATCGCG GACATCCGCG AGACGCTGAT GTTCGGCGAG ACGAGCCTCG GCGACACCGG CCACAGCGGC GCGACGCGCG CGATGACGAT GGCCGACGAC GCCGAGGTAT GCGGCTGCAA CGGCGTGTGC AAGGGCACGA TCGTATCGGC GATCAAGGAA AAAGGCCTCT TCACGCTCGA CGACGTGCGC AGGCACACGA AGGCGTCGGC GTCGTGCGGC TCGTGCACCG GCCTCGTCGA GCAGATCCTG ATGTCGACGC TCGGCGGCGA CTATTCGGCG TCGCCGAAGG CGAAGCCCGT ATGCGGCTGC ACCGATCATA CGCATGCCGA AGTGCGCGCG GCGATCCGCG AGCACAAGCT GCTGTCGGTG CCGGAGGCGA TGCGCTTTCT CGAATGGCGC ACGCCGAACG GCTGCTCGAG CTGCCGCCCG GCGCTCAACT ACTACTGCAT CAGCACGTGG CCGCACGACG CGAAGGACGA TCCGCAGTCG CGCTTCATCA ACGAGCGCGC GCACGCGAAC ATCCAGAAGG ACGGCACGTA TTCGGTCGTG CCGCGGATGT GGGGCGGCGT GACGAGCGCC GACGAGTTGC GCCGCATCGC CGACGTCGTC GACAAGTACG CGATCCCGAC CGTCAAGGTG ACGGGCGGCC AGCGCATCGA TCTGCTCGGC GTAAAGAAGG AGGACCTGCC CGGCGTGTGG CGCGACCTCG GCATGCCGAG CGGCCACGCG TACGCGAAGG CGCTGCGCAC GGTGAAGACC TGCGTCGGCT CCGAATGGTG CCGCTTCGGC ACGCAGGATT CGACGCTGAT GGGCCAGCAG CTCGAACGCG CGCTGTGGCG GATGTACGCG CCGCACAAGG TGAAGCTCGC GGTGTCCGGC TGCCCGCGCA ACTGCGCGGA ATCGGGGATC AAGGACGTCG GCGTGATCGG CGTCGATTCG GGCTGGGAGA TCTACGTCGG CGGCAACGGC GGCATCAAGA CCGAAGTCGC GCAGTTCTTC TGCAAGGTGA AGACGCACGA GGAGGTGCTC GAATATGCGG GCGCGTTCCT GCAGCTGTAT CGCGAGGAAG GCTGGTATCT CGAGCGCACC GTGCACTATC TCGAGCGCGT CGGCCTCGAC CACGTGAAGG CGCGCGTGCT CGACGACGCC GAGAACCGCC GCGCGCTGTG GGACAGGCTG CAGTTCGCGC TGAAGGACGA GCCGGACCCG TGGCACGACA CGCAGAACGC GAAGGTCGAT CTGCGCCAGT TCATCCCGAT CGCCGTCGCG CCCGCCGATG CGTGA
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Protein sequence | MRKMKLVMVG NGMAGVRTLE ELFKLAPDLY DVTVFGAEPH PNYNRILLSP VLAGEQTLEQ IVLNDYAWYA SHGVTLHVGK KIVKIDRVKR VVIADDGTEA AYDRLLLATG SNPFMLPVPG AQLDGVLGYR DIADTQAMID AAARHTHAVV IGGGLLGLEA ANGLKLRGMD VTVVHLAPTL LERQLDAKAG GLLRASLEAR GLTFLMPKQT QALVGDEHGR VRAVHFKDGG ECKADLVVMA VGIRPNTALA ESAGLYCNRG IVVNDTMQTY DPRIYAVGEC VSHRGIAYGL VAPLFEQAKV AANHLAQFGI GRYTGSVTST KLKVTGIDLF SAGDFLGGDD TEDITLSDPI AGVYKKLVIK DDRIVGACLY GDTADGAWYF KLLREGRNIA DIRETLMFGE TSLGDTGHSG ATRAMTMADD AEVCGCNGVC KGTIVSAIKE KGLFTLDDVR RHTKASASCG SCTGLVEQIL MSTLGGDYSA SPKAKPVCGC TDHTHAEVRA AIREHKLLSV PEAMRFLEWR TPNGCSSCRP ALNYYCISTW PHDAKDDPQS RFINERAHAN IQKDGTYSVV PRMWGGVTSA DELRRIADVV DKYAIPTVKV TGGQRIDLLG VKKEDLPGVW RDLGMPSGHA YAKALRTVKT CVGSEWCRFG TQDSTLMGQQ LERALWRMYA PHKVKLAVSG CPRNCAESGI KDVGVIGVDS GWEIYVGGNG GIKTEVAQFF CKVKTHEEVL EYAGAFLQLY REEGWYLERT VHYLERVGLD HVKARVLDDA ENRRALWDRL QFALKDEPDP WHDTQNAKVD LRQFIPIAVA PADA
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