| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0344 |
|---|
| Symbol | |
|---|
| ID | 4885095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 322038 |
|---|
| End bp | 323000 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640126272 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001057397 |
|---|
| Protein GI | 126441320 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC TCGTCAGCAT GAATGTGTTC CGCTATGTCG TCGAAGTCGG CAGCTTCGTC
GGCGCGGCCG AGCGCATGGA GATGTCGGCG GCGATGGCGA GCAAGCACGT GATGCATCTC
GAGCACCAGC TCGGCGCGCG TCTCCTGCAT CGCACGACGC GCCGCGTCGC GCCGACGGAG
GCGGGGCGCG AATACTACGA GCGGCTCGTG CAGGCGCTCA CCGAACTCGA CGAGGCCGGG
CAGGCGGTGG GCGCCGCGAG CGTCGTGCCG CAGGGGCGGC TGCGCGTGAC GTCGCTGTCC
GCGTTCGGGC TGCGCCACGT GATGGACGCG GTGACGTCGT ACGCCGAGCG CTACGCCGAC
GTGACGGTCG AGATCACGTT GTCCGATCGT GTCGTCGAGC TGATCGACGA AGGCTACGAC
GTCGCGGTGC GCGCCGCGCC CGCCGGCATG AAATCGTCGT CGCTCGTCGC GCGGCAGATC
GCGACCGCGC ACATCCTGCT CGTCGCGTCG CCCGACTATC TCGCGAAGCA CGGCACGCCG
GCGACGATCG CCGATCTCCA GCATCACAGC TTCATTCGCC GCGAGCCGAA CGAGACGCTG
CTAGACGCGG CGATCTCCGA GGTCGCGGCC GCCTCGCGCG TGCCGATGTC GGGCAACGTG
ATCGTCAACC ATCTCGAAGG GCTGCGCGTC GCGGTGCTGG GCGGCGCGGG CATCGCGCTG
CTCGGCACCG AAGTGGTCGG CGAGGACATC GAGTCCGGTC GCCTCGTGCC GCTGCTGCTC
GATGCGCTGC CGCCGCGCGA GCTGCCGATC TACGCGGTGT ACGCGAGCCG GCGGCACGTA
TCGGCGAAGG TGCGCTCGTT CGTCGATTTC CTTGCCGATC GCTTCGCCGG CCAGTCGCTG
TGCCCGTCGA TCGACGAGCG GCTGCGGCAG CTCGCGATGC CGCGGATGAA GCGGCTCGGG
TGA
|
|---|
| Protein sequence | MDTLVSMNVF RYVVEVGSFV GAAERMEMSA AMASKHVMHL EHQLGARLLH RTTRRVAPTE
AGREYYERLV QALTELDEAG QAVGAASVVP QGRLRVTSLS AFGLRHVMDA VTSYAERYAD
VTVEITLSDR VVELIDEGYD VAVRAAPAGM KSSSLVARQI ATAHILLVAS PDYLAKHGTP
ATIADLQHHS FIRREPNETL LDAAISEVAA ASRVPMSGNV IVNHLEGLRV AVLGGAGIAL
LGTEVVGEDI ESGRLVPLLL DALPPRELPI YAVYASRRHV SAKVRSFVDF LADRFAGQSL
CPSIDERLRQ LAMPRMKRLG
|
|---|
| |