Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0180 |
Symbol | |
ID | 4884526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 175160 |
End bp | 176473 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640126108 |
Product | major facilitator transporter |
Protein accession | YP_001057233 |
Protein GI | 126438382 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00901] AmpG-related permease |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.277448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAAAC CGCCGCACGA CGCGCCCGCC CTCAACGCCC ACGAGGACCA TCCGGGCTGG CGCGCGTTTC TGAACACGCA CATGCTGATC TGCGTCTTTC TCGGCTTCAC GTCGGGACTG CCGCTCTTCA CGCTCGTCTA CCTGGTGCAG GCCTGGCTGC GCTCGGAAGG CGTGAATCTG AAGGAAATCG GCCTCTTCGC GCTCATTCAG TTCCCCTATA CGTGGAAGTT CCTGTGGGCG CCGCTGATGG ACCGCTTCAT CCCGCGCCTG CCCGGCTGGC GGCCGGGGCG GCGGCGCGGC TGGATGTTCG TCACGCAGTT GCTCGTCGCG GGCGCGATCG CCGCGCTCGG CTTCGTGTCG CCGCGCGAAT CGATCTGGAC GGTCGCCGCG CTGACGACGC TCGTCGCGTT CTTCGGCGCG AGCGCCGACA TCGTGATCGA CGCATACCGC CGCGAGCTGC TGCGCGACAC CGAGCAGGGC CTCGGCAACG CGGTGCACGT GAACGCGTAC AAGGTCGCCG CGCTGATTCC CGGCTCGCTG TCGCTGATCC TGTCCGACCA TCTGCCGTGG GACGCCGTGT TCGCGCTCAC CGCCGCGTTC ATGCTGCCCG GCATCCTGAT GACGCTCGTC GTGCGCGAGC CGGACGTGCA CGGCGCGCCG CCGAAGAACC TGTCGGAAGC GGTGATCATG CCGTTTCGCG AATTCATCGG CCGCGACGGC TGGCGCGGCG CGCTGCTCGT GCTCGGCTTC ATCTTCCTCT ACAAGCTCGG CGACACGATG GCGACGACGC TTTCGACGTC GTTCTTTCTC GATCTCGGCT TCAACAAGAC GCAGATCGGC GTGATCGCGA AGACGACCGC GTTCTGGGCG AGCCTCGCGG GCGGCATCAT CGGCGGCGTG TGGCTCGTGA AGATCGGCAT CGCGCGCGGG CTGTGGATCT TCGGGGTCCT GCAGATCGTG TCGACGCTCG GCTTCGCGTG GCTCGCGAAG GCGGGCCCGG ACCCGGTGCT GATGGCCGCC ATCTACGGCT TCGAGACGTT CTCGACGGGC CTCACGCTCG CCGCGTTCAC CGCATACATC GCGAGCACGA CGGACCCGCG CTATACCGCG ACGCAGTTCG CGCTCTTCAC GAGCCTCGCG TCGGTGCCGC GCACGCTCGC GTCGGCGTCA AGCGGCTTCA TCGTGGCGCA GATCGGCTGG TTCGACTATT TCCTCGTCTG TGCGGCGCTC GGCATTCCCG GGATGCTGCT GCTGTTCAAG ATCGCGCCGT GGAACGGCAG CATGTCAGGC AACGAGGCCG CCCGTGCAGG CTAA
|
Protein sequence | MTKPPHDAPA LNAHEDHPGW RAFLNTHMLI CVFLGFTSGL PLFTLVYLVQ AWLRSEGVNL KEIGLFALIQ FPYTWKFLWA PLMDRFIPRL PGWRPGRRRG WMFVTQLLVA GAIAALGFVS PRESIWTVAA LTTLVAFFGA SADIVIDAYR RELLRDTEQG LGNAVHVNAY KVAALIPGSL SLILSDHLPW DAVFALTAAF MLPGILMTLV VREPDVHGAP PKNLSEAVIM PFREFIGRDG WRGALLVLGF IFLYKLGDTM ATTLSTSFFL DLGFNKTQIG VIAKTTAFWA SLAGGIIGGV WLVKIGIARG LWIFGVLQIV STLGFAWLAK AGPDPVLMAA IYGFETFSTG LTLAAFTAYI ASTTDPRYTA TQFALFTSLA SVPRTLASAS SGFIVAQIGW FDYFLVCAAL GIPGMLLLFK IAPWNGSMSG NEAARAG
|
| |