Gene BURPS668_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0117 
SymbolalkA 
ID4885075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp114211 
End bp115152 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content75% 
IMG OID640126045 
ProductDNA-3-methyladenine glycosylase II 
Protein accessionYP_001057172 
Protein GI284159957 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.27704e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGCCG CCGTCGAACC GGCCGCCGTG CGGCCCGACA GCGTCGTGCT CGAGCTGCCG 
TTCAAATCGC CGTACGATTG GCCGCGCGTG CTGCGCTTCT TCGCGGGGCG CGCGATTCCG
GGCGTCGAGG CGGTCGGGGA CGGCGCGTAT CGGCGCACGG TCGACCATCA CGGCGCGATC
GGCACGTTGA CGGTGCGCAA GCATCCGCGC AAGCGCTGTC TTGTCGCGCT CGTCGAGGGC
GATGCGGCGC GGCATGCGGA CGCTGCATTC GCCGCGCGGC TTTCGACGAT GTTCGATTTG
CGGGCCGATC CGGCCGCGAT CGGTGCGCAT CTCGCGCGCG ACGCGTGGTT CGCGCCGCTC
GTCGGCGCCG CGCCCGGCCT GCGCGTGCCG GGCGCGTGGT CGGGCTTCGA GCTGATCGTG
CGCGCGATCG TCGGCCAGCA GGTGAGCGTG AAGGCCGCGA CGACGATCGT CGGGCGGCTC
GTCGAGCGCG CGGGCGAGCG GCTTGCCCCG CACGCGCCGG GCGCGATCGG CTGGCGGTTT
CCGGAGCCCG CCGCGCTCGC CGCGTGCGAC TTGTCTCGCA TCGGGATGCC GGGCAAGCGT
GCCGCGGCGC TGCAGGGCGT CGCGCGCGCG GTCGCCGCGG GCGACGTGCC GCTCGATGCG
TACGCGAGCG ATCCGGCCGG CGTGCGCGCC GCGCTGCTCG CGCTGCCGGG GATCGGCCCG
TGGACCGTCG AATACGTCGC GATGCGCGCA TGGCGCGACG CCGACGCATG GCCCGCGACC
GACCTCGTGT TGATGCAGGC GATCGTCGCG CGCGACCCGG CGCTCGACCG GCCGGCAAGC
CAGCGCCTGC GCGCCGATGC GTGGCGGCCG TGGCGCGCGT ATGCGGCGAT GCATCTATGG
AACGAGATCG CCGATCGCGC CGGTTCGGCG CGCGGCGGAT AG
 
Protein sequence
MSAAVEPAAV RPDSVVLELP FKSPYDWPRV LRFFAGRAIP GVEAVGDGAY RRTVDHHGAI 
GTLTVRKHPR KRCLVALVEG DAARHADAAF AARLSTMFDL RADPAAIGAH LARDAWFAPL
VGAAPGLRVP GAWSGFELIV RAIVGQQVSV KAATTIVGRL VERAGERLAP HAPGAIGWRF
PEPAALAACD LSRIGMPGKR AAALQGVARA VAAGDVPLDA YASDPAGVRA ALLALPGIGP
WTVEYVAMRA WRDADAWPAT DLVLMQAIVA RDPALDRPAS QRLRADAWRP WRAYAAMHLW
NEIADRAGSA RGG