| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0096 |
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| Symbol | trmE |
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| ID | 4885676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 90896 |
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| End bp | 92299 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640126024 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001057151 |
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| Protein GI | 126440482 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCCA CTGATTCCGA TCCGATCGTC GCCATTGCCA CCGCGTCAGG CCGAGGCGGG
ATCGGCGTCG TGCGCCTTTC GCTCGGGCGA GCGGGGGAAG CGGCGGCGCG CGCGCTGAGC
GATGCGCTGT GCGGTGCGCG ACTCATGCCG AGGCATGCGA GCTACGTGCC GTTTCTCGAC
GGCGCGGGCG AGCCGCTCGA TCGCGGCATC GCGCTCTATT TCCCCGCGCC GCATTCGTAT
ACGGGCGAGC ACGTGATCGA GCTGCAAGGC CACGGCGGGC CGATCGTGCT GCAGCTCTTG
CTGCAGCGCT GCCTCGACGC CGGGCGTGCG CATGGGCTGC GGCTCGCTGA GCCGGGCGAA
TTCACGCGCC GGGCGTTCCT GAACGACAAG CTCGATCTCG CGCAGGCGGA GGCCGTCGCC
GATCTGATCG AGGCGAGCAC CGAGGCGGCC GCGCGTTCGG CGGGCCGCTC GCTCGACGGG
GCGTTCTCGC GCGACATCCA CGCGCTCGTC GACGACGTGA TCGCGCTGCG GATGCTCGTC
GAGGCGACGC TCGATTTTCC GGAGGAGGAG ATCGACTTCC TGGAGGCGGC CGACGCGCGC
GGCAAGCTCG CGCACATCCG CGAGCGGCTC GCGCACGTGC TCGGCGACGC GCGGCAGGGG
GCGTTGTTGC GCGAGGGGCT ATCGGTCGTG CTTGCCGGGC AGCCGAACGT CGGCAAGTCG
TCGCTGTTGA ATGCGCTCGC GGGCGCGGAA CTGGCGATCG TCACGCCGAT CGCCGGCACG
ACGCGCGACA AGGTTGCGCA GACGATTCAG ATCGAGGGCA TTCCGTTGCA CATTATCGAT
ACGGCGGGCT TGCGCGAAAC GGAGGACGAG GTCGAGAAGA TCGGCATCGC GCGCACGTGG
GGCGAGATCG AGCGGGCGGA CGTCGTGCTG CACCTGCTCG ATGCGAGGAG CGGGCTTGGC
CCGGGCGACG AGGCGATCGC CGCGCGCTTC CCGGACGGCG TGCCGGTGGT GCGCGTGCTG
AACAAGACGG ATCTGACGGG CGCGCCGGCA TCGGTGACGC GGACAGGCGG CGGCGCGGCG
CGCGCGGACG TATGTGAAGT GCGGCTGTCG GCGAAGCGCG GCGACGGGAT CGATTTGCTG
CGCGGCGAGC TGCTGCGGAT CGCCGGTTGG CAGGCGGGTG CGGAAAGCGT GTATCTCGCC
CGCGAGCGGC ATCTGATCGC GCTGCGCGCG GCGCAGGCGC ATCTCGCGCG GGCGGCGGAG
CACGCGGAGC AGAATGCGCA GGCGCTGGAT CTCTTCGCCG AGGAACTGCG GCTCGCGCAG
GAGCGGCTTA ATTCGATCAC CGGGGAGTTT ACGTCCGATG ATTTGTTGGG GGTGATTTTT
AGTCGGTTTT GTATCGGAAA ATAA
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| Protein sequence | MLATDSDPIV AIATASGRGG IGVVRLSLGR AGEAAARALS DALCGARLMP RHASYVPFLD
GAGEPLDRGI ALYFPAPHSY TGEHVIELQG HGGPIVLQLL LQRCLDAGRA HGLRLAEPGE
FTRRAFLNDK LDLAQAEAVA DLIEASTEAA ARSAGRSLDG AFSRDIHALV DDVIALRMLV
EATLDFPEEE IDFLEAADAR GKLAHIRERL AHVLGDARQG ALLREGLSVV LAGQPNVGKS
SLLNALAGAE LAIVTPIAGT TRDKVAQTIQ IEGIPLHIID TAGLRETEDE VEKIGIARTW
GEIERADVVL HLLDARSGLG PGDEAIAARF PDGVPVVRVL NKTDLTGAPA SVTRTGGGAA
RADVCEVRLS AKRGDGIDLL RGELLRIAGW QAGAESVYLA RERHLIALRA AQAHLARAAE
HAEQNAQALD LFAEELRLAQ ERLNSITGEF TSDDLLGVIF SRFCIGK
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