| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0070 |
|---|
| Symbol | |
|---|
| ID | 4883323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 66074 |
|---|
| End bp | 67294 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640125998 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001057125 |
|---|
| Protein GI | 126438578 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCTC CAGGAGATGA ATCGCGCGGC GCGTCGGTGC CGACGGCGGG CTGTTTGCGG
TATTTGAGCA AGTCCGGGAC AATCTGCGTT GATCCGAAAC GCCATTTTCT TGTTATGAAA
AAACTGCTGC GCGGCACCGG CCGGCCCGGG GTCGCCATCC TGCTGCCGCC TCGGCTGTTG
GGCGGCTATG TGTTTCTCAC GCAAGAGCTG CTGCTGCTCG CCGGCACGAT GAAGGCGCGC
AGCCTCGACG TCGTGAACAG CCGGCTGTTC GACATCGCGA TCCTGTCGCA CGACGGGCGG
CCGGTGCCGA CGATCGGCGG CCTCGACGTG CCGGCGACGG CCGCGCTGAG CGACGCCGAC
GCGCACGAAG TGGTGATCGT GCCCGCGCAG TTCATGCCGG ACGCGCAGAT CGGCGCGCTC
GAGCGCGTGT TCATCGATTG GCTGGAGCGC CGCTACGCGG CGGGCGCGCT CGTCGTCGGG
CTCAACGCGG CGCCGCTCCT CGCGAAGGCC GGCCTGCTCG ACGGCCGCGG CGCCACCGGG
CTGCCGAGCG AGCGCACGCT GTTCGCGCGG CATTTTCCGG CGGTGCGCTA CACGCCGTCG
AAACCGCTCG TCGTCGACGG GCGGCTCATC ACGGTGAGCG GGATCAACCC GGCCGTCGAC
GCGTGCGCGT ACGTGATCGA TTACTGCTTC GGCGCGGGCG TGTCGCAGCG GCTGCTGCGG
GTCGCGCTCA CGCAATCGCT GCCGTCGTAC GAGCACATGG CCGTGTGGGC CGCACAGTAC
AAGCGGCACG GCGACGCGCC GGTGCTCGCG GTGCAGGACA GCGTCGAGCG CGCGCTCGCG
CACCCGCCGA CGCTCGCCGA GCTCGCCGCG CGCGCGGCGA TGAGTGAGCG CACGCTGTCG
CGCCGTTTCG CGGCCGCGAC CGGGCTCACG CTGCGGCGCT ACGTCGCCGC GCTGCGCGTC
GAGCTCGCCG CGTTCCTGCT GCGCACGAGC CGGATGACGC TCGAGCACAT CGCCGACGAA
TGCGGCTTCG CGAGCGCGAG CGCGCTGAGC CATGCGTTTC TCGCGGGGCA GGGATGCAGC
CCGATTCAGT ACCGGAATCG GCATCGGCCC GATGCGCGGC CCGACGCGCG GCGCGAGCCG
GCGGGCGGCG GCGGCACGGG CGGCACGGCG GCGGGGTCGG GCGAAGGCGC GGCGAGCTCG
GGGGGACGAG CCGGGAAATG A
|
|---|
| Protein sequence | MASPGDESRG ASVPTAGCLR YLSKSGTICV DPKRHFLVMK KLLRGTGRPG VAILLPPRLL
GGYVFLTQEL LLLAGTMKAR SLDVVNSRLF DIAILSHDGR PVPTIGGLDV PATAALSDAD
AHEVVIVPAQ FMPDAQIGAL ERVFIDWLER RYAAGALVVG LNAAPLLAKA GLLDGRGATG
LPSERTLFAR HFPAVRYTPS KPLVVDGRLI TVSGINPAVD ACAYVIDYCF GAGVSQRLLR
VALTQSLPSY EHMAVWAAQY KRHGDAPVLA VQDSVERALA HPPTLAELAA RAAMSERTLS
RRFAAATGLT LRRYVAALRV ELAAFLLRTS RMTLEHIADE CGFASASALS HAFLAGQGCS
PIQYRNRHRP DARPDARREP AGGGGTGGTA AGSGEGAASS GGRAGK
|
|---|
| |