Gene BURPS668_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0055 
Symbol 
ID4882245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp52082 
End bp53131 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID640125983 
ProductABC transporter, permease protein 
Protein accessionYP_001057110 
Protein GI126439501 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGC CTCTCGCCTT CGCCGCGCCG CCGCGCGATG CGGCCGCCCG CGCGAAGCCC 
GCCGGCGCGC GCCTTGCGCT CGTCGCGACG CTCGGCACGC TCGCCGCGAT CGCGCTCGTC
GTGCCCGCCG TCGCCGACGC TTACTGGATC AAGACGCTCA CCTCCGCGCT GACGATCAGC
ATCGCCGCCG CGGGCGTCGC GCTGCTGTAT CGGCAACTCG GGCTGGTGTG CCTGTCGCAA
CACGCGCTGC TCGGCGTCGG CGGCTGGATC GCGCTCAGGC TCGCGCATCT CGGCGCGCCG
TTCGAGTTGT GCGTGCTCGC GGGCGCGGCG GGCGGCAGCG CGATCGGGAT GATCGCGGGG
CTTCCCGCGC TGCGCCTGCG CGGCCTCTAT CTCGCGCTCG TCACGCTGAT GATGGCGGGC
GGGTTTCAGG TGGTCGTGTC CGCCATCGGC TTTCCCGACG GCGGCGGCGG CTTCACCGGC
CATTTGTCGT TCGGCGCGCG GCAGATGATG GCGCGGCCGC TCGTCGGCCA GAGCGATGCG
GCGTATTTCC GCTACGTCGC CGCGTGGGCC GCGCTCGCGT TCGCGCTGAT CGAGCTGCAT
CGGCGCTCGA AAGCGGGGCG CTCGTGGGCG CTGATCCGGC GCGGCGAGAT GCCGGCGCTC
GCCGCGGGCG TGAACGTCGT GTTCTACCAA ACCTGGGCGT TCGGGCTCGC GGGCCTGCTC
GCGGGGCTCT CGGGCGGCTT GCTCGCGGGC TCGGTCGGCC AGCTCGACGG GCGCGCGTTC
GCCGCGTCCG AATCGGTGCT GCTGTTCGCG CTGTCGGTGG TCGGCGGCGT CTATCACTGG
TTCGGCGCGC TGATCACCGG GCTGCTGCTG CGCGCAGTGC CCGCGCTCCT GACCGATTTC
GGCGTGAACG GTTATCTCGC GATGATCTTC TTCGGCGCGG CGCTGCTGCA TGCGCTCGTC
ACGGCGCCCG CCGGCATCGC CGGGCAGCTT GCCGGGCTCG CGTCGCGGGT CGGGCGCGCG
TTTCGCGCCC GCGACGGAGG CGCGCGATGA
 
Protein sequence
MKTPLAFAAP PRDAAARAKP AGARLALVAT LGTLAAIALV VPAVADAYWI KTLTSALTIS 
IAAAGVALLY RQLGLVCLSQ HALLGVGGWI ALRLAHLGAP FELCVLAGAA GGSAIGMIAG
LPALRLRGLY LALVTLMMAG GFQVVVSAIG FPDGGGGFTG HLSFGARQMM ARPLVGQSDA
AYFRYVAAWA ALAFALIELH RRSKAGRSWA LIRRGEMPAL AAGVNVVFYQ TWAFGLAGLL
AGLSGGLLAG SVGQLDGRAF AASESVLLFA LSVVGGVYHW FGALITGLLL RAVPALLTDF
GVNGYLAMIF FGAALLHALV TAPAGIAGQL AGLASRVGRA FRARDGGAR