| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0044 |
|---|
| Symbol | |
|---|
| ID | 4882911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 40428 |
|---|
| End bp | 41588 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640125972 |
|---|
| Product | putative porin |
|---|
| Protein accession | YP_001057099 |
|---|
| Protein GI | 126441436 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTCA ACACGATATC GGAGGGGACG ATCTTGAAAC GACAATACCT GGCACTTTCC
ATCGCGACGG CCGCCTGCGC GGCGCCGCAA GCGCACGCGC AGTCGAGCGT CCAGCTCTAC
GGGCTCATCG ACCTGAGCAT TCCGACCTAT CGCTCGCACG CGAACGCGAA GGGCGATCAC
GTGATCGGCA TGGGGCTCGG CGGCGAGCCG TGGTTCAGCG GCAGCCGCTG GGGGCTGAAG
GGCGCGGAGG ACATCGGCGG CGGCACGAAG GTGATCTTCC GGCTCGAAAG CGAATACACG
GTAGCCGACG GCAACATGGA GGACCCGGGC CAGATCTTCG ACCGCGATGC GTGGGTCGGC
GTCGAAAACG ACACGTTCGG CAAGCTCACC GCGGGCTTCC AGAACACGAT CGCGCGCGAC
GCGGCGGCGA TCTACGGCGA CCCTTACGGC TCGGCGAAGC TCACGACCGA GGAAGGCGGC
TGGACGAACG CGAACAACTT CAAGCAGATG ATCTTCTACG CGGCCGGTGC GACGGGCACG
CGCTACAACA ACGGCCTCGC GTGGAAGAAG CTGTTCGGCA ACGGCATCTT CGCGAGCGCG
GGCTACGCGT TCAGCAATTC GACGAGCTTC GGGCAGAACT CGACCTATCA GGTCGCGCTC
GGCTACAACG GCGGCCCGTT CAACGTGTCG GGCTTCTTCA GCCACGTGAA CCACGCGGGC
TACGCGAACA AGTCGTTCTC GGTCGGCGGC AACTACACGT TCGACATCTT CCGCGTGAAC
GCCGGCTACT TCCGCTACCT GGGCGATCAG GGCGCGCTCG GCCAGCGCCA GGACAACGCG
TGGACGGTGT CGTTCAAGGT CGCGCCGAAG GGCGCGCTCG ACTACGAGCT CGGCTATCAG
CAGATGCGCG TGCACAACGC CGCGTACAAC AGCGACGGCA ACGTGCCGAA CGCGAACATC
GGCGACTTCA GCCTCACGTC GGGCGTCGGC AACGGCTTCA AGGAAACGCT GTACGGCTCG
GTGTTCTACC ACCTGTCGAA GCGTACCGAG CTGTACCTCG CCGGCGACTA CATGCGCCTG
CACGGCGGCT ATACGGTCGC GTCCACGCAC GGCGCGACCA ATCAGCTCGA GCTGACGACC
GGCATCCGCA CGCGGTTCTG A
|
|---|
| Protein sequence | MAVNTISEGT ILKRQYLALS IATAACAAPQ AHAQSSVQLY GLIDLSIPTY RSHANAKGDH
VIGMGLGGEP WFSGSRWGLK GAEDIGGGTK VIFRLESEYT VADGNMEDPG QIFDRDAWVG
VENDTFGKLT AGFQNTIARD AAAIYGDPYG SAKLTTEEGG WTNANNFKQM IFYAAGATGT
RYNNGLAWKK LFGNGIFASA GYAFSNSTSF GQNSTYQVAL GYNGGPFNVS GFFSHVNHAG
YANKSFSVGG NYTFDIFRVN AGYFRYLGDQ GALGQRQDNA WTVSFKVAPK GALDYELGYQ
QMRVHNAAYN SDGNVPNANI GDFSLTSGVG NGFKETLYGS VFYHLSKRTE LYLAGDYMRL
HGGYTVASTH GATNQLELTT GIRTRF
|
|---|
| |