Gene BURPS668_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0015 
SymbolgspJ 
ID4882908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp15472 
End bp16200 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content72% 
IMG OID640125943 
Productgeneral secretion pathway protein J 
Protein accessionYP_001057070 
Protein GI126438787 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID[TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAG CCGTCCGCTC TGAGCGCCGC GCGCCCGGCG AGAAACGCCC GCCGCGGGCG 
CGCCGCGCCT TCCGGCGAGG CGCGCGCCAC GGCGCGCGCG GCTTCACGCT GATCGAAATG
ATGATCGCGA TCACGATTCT CGCGGTGATC GCGATCCTGT CGTGGCGCGG GCTCGACCAG
ATCATCCGCG GCCGCGAGAA GGTGGCGGCC GCGATGGAGG ACGAGCGCGT GTTCGCGCAG
ATGTTCGACC AGATGCGCAT CGATGCGCGG CGCGCGGCGA CCGACGACGA AGCGGGCCAG
CCCGCGGTGC GCGTCGCGGG CGACACGCTG CAGATCGTGC GCGAGTTCGA CGCGCCGGGC
GCGGCGCCAC GCCTGCAGGT CGTGCGCTAC CGGATTTCGA ACGGGCGCGT CGTGCGTTAC
GCGTCGCCGC CGATCGGCGA CGTCAACGCG CTGCGCGACG CGCTGCGCGG CGGCGATACC
GAAGGCTGGA GCGAGGTGGC GCTGATGCGC GGCGTCGGCA TGATCAACGC GCGGCTGTAC
GTGCCGAAGG TCGGCTGGAC GACCAGCATG CCGGACGCCG ACAACGCGCT CGAGCAGAAC
AACAACGCGC TCAAGGTGCC GATGCTCGGC AACGCGCCGC CGCCGCGCGC GGTGACGGGG
CTCGAGGTGA GCATCGGCGC GACGTCGCTG CGCGTGCCGA TCACGCGCAT TTTCCTGATC
GGGGAGTGA
 
Protein sequence
MKPAVRSERR APGEKRPPRA RRAFRRGARH GARGFTLIEM MIAITILAVI AILSWRGLDQ 
IIRGREKVAA AMEDERVFAQ MFDQMRIDAR RAATDDEAGQ PAVRVAGDTL QIVREFDAPG
AAPRLQVVRY RISNGRVVRY ASPPIGDVNA LRDALRGGDT EGWSEVALMR GVGMINARLY
VPKVGWTTSM PDADNALEQN NNALKVPMLG NAPPPRAVTG LEVSIGATSL RVPITRIFLI
GE