Gene Pcal_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2164 
Symbol 
ID4909835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp2000610 
End bp2001641 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID640125918 
ProductH+-transporting ATP synthase subunit C 
Protein accessionYP_001057045 
Protein GI126460767 
COG category[C] Energy production and conversion 
COG ID[COG1527] Archaeal/vacuolar-type H+-ATPase subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CGTTCAAAAG GCCATACCTA GGACCTCGGG TTAGGGGGCT CCGCATTAGC 
GAATTGCCAA GAGACAAACT ACTAATGCTC GCGTACTCTA ACACTCTTGA CGAATTTCTC 
AATGTACTAA AAACAACGCC GTACGCAGTT TCCATAGATA GGCTAACTAG AGAAAATATC 
GCTGAGCTTA GGCGCGAGTT GATTAAAATT TACCTGGATA AAATAAGGTC TATTTTTCTA 
GGCTCCGGTA AAGATGTTAA AGAGGTAGTT TTAGCATCTA TTAAATTTTT TGAATTTGAC 
AACATTAGAA ACATAGCATC TGCCATAAAA GCTGGTAAAA ATCCTGAAGA TTTTATAATT 
TGGGAACCCC TTGAGTTTAC ACGTAGAAGG CATATAATCG CAAGTCTCTT AGGGTCAAAA 
AACGTGGAGG AAATAGGGGC TCGCTTAGAG CAACTACGCC ACCCCGCGTC CAAGGCTTTT 
GCCTTCGCGG CAAAATATGG AGAAGACAAA ATAAGCTTCT TTATAGATAG ACAATGGCTA 
GAAGATTTTA CAAATACGCT GACAGCCAAG CGAGAGAGAT CTCTTACAAC GTTCGCAGAG 
GAGGTCAGAG ATTACATCAA CGCATCGATT GCGATACGGG CTAGGATTTG GGGCCTCTCA 
GACGAGTTAA ACGAGCTAAT AGTGGGGAGG CCAACGCCTG TTGTACTATC TGCGGCAAGA 
GACCCCCCTG CCAAGTTCTT AGAATTTGCA GAGGCGCTAC CATGGGGCAG GCTTTTGATA 
AGCGCGGTGG CAGAGTCGCC ATCTCTTGAA AACATAGCAG TCGCCATGGA TAATATATAT 
CCTGCCTACA TGAAAAAGCT GTCAGATATA TACATAGCGC GGTTTACTGA ATTCTCTCTG 
GGCGCATTGG CGGCGCAACT TGAATATATG AGATCAGAAG TTGTTACAAT TATAAAAGCG 
GCCAGTTTAA TCGCTGAGGG TATAAGCGCA GAAAAAAGAA AAGAAATCTT TGAGCCTCTC 
GTCAAAATCT AG
 
Protein sequence
MSATFKRPYL GPRVRGLRIS ELPRDKLLML AYSNTLDEFL NVLKTTPYAV SIDRLTRENI 
AELRRELIKI YLDKIRSIFL GSGKDVKEVV LASIKFFEFD NIRNIASAIK AGKNPEDFII 
WEPLEFTRRR HIIASLLGSK NVEEIGARLE QLRHPASKAF AFAAKYGEDK ISFFIDRQWL 
EDFTNTLTAK RERSLTTFAE EVRDYINASI AIRARIWGLS DELNELIVGR PTPVVLSAAR 
DPPAKFLEFA EALPWGRLLI SAVAESPSLE NIAVAMDNIY PAYMKKLSDI YIARFTEFSL 
GALAAQLEYM RSEVVTIIKA ASLIAEGISA EKRKEIFEPL VKI