Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2160 |
Symbol | |
ID | 4909379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1998120 |
End bp | 1998593 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640125914 |
Product | hypothetical protein |
Protein accession | YP_001057041 |
Protein GI | 126460763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGTGA TTACGCTATT GGCCGTGGCC TTGGCCGTTT TAGTGATCGT GGTGGGACCC GTGGCTGTGC CTCAATACGC CACGGCGCGT GTTGAGGTCG GTAGTTTTAG GATTACGGTA GGCGGCTCAT ATTACAATTT TCCTCAGGTT TACGAGCCGC TTTCCATAGT CGTAGTGGTG GCGCTTTTGG CTGTGGCTAC CTATTTGGAA TATCTTGCTA AGATCAAGGT GCCGCGGCTG GCAGAAGTCG TGGCAGCCCT ATCCCTCTTC TTCGCGCTTC CCCTTCCACA TATTTTCGTA GTAGGCAGTG GAGATATAGC TATTGTGTTT AGCAACTATG CAAAGTATAT GTCGTTGCCC GTGTTTGCCG TAGCTCTTTT GTTGGTGGTT GTTGAAAGGT TGGCGCTGCC TCAGAGCAGG GCCAGAGTCT TAATGGATCT TTCTACGACT ATAGAAAAGA CTGAGAAGGC GTGA
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Protein sequence | MDVITLLAVA LAVLVIVVGP VAVPQYATAR VEVGSFRITV GGSYYNFPQV YEPLSIVVVV ALLAVATYLE YLAKIKVPRL AEVVAALSLF FALPLPHIFV VGSGDIAIVF SNYAKYMSLP VFAVALLLVV VERLALPQSR ARVLMDLSTT IEKTEKA
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