Gene Pcal_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2160 
Symbol 
ID4909379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1998120 
End bp1998593 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content50% 
IMG OID640125914 
Producthypothetical protein 
Protein accessionYP_001057041 
Protein GI126460763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTGA TTACGCTATT GGCCGTGGCC TTGGCCGTTT TAGTGATCGT GGTGGGACCC 
GTGGCTGTGC CTCAATACGC CACGGCGCGT GTTGAGGTCG GTAGTTTTAG GATTACGGTA
GGCGGCTCAT ATTACAATTT TCCTCAGGTT TACGAGCCGC TTTCCATAGT CGTAGTGGTG
GCGCTTTTGG CTGTGGCTAC CTATTTGGAA TATCTTGCTA AGATCAAGGT GCCGCGGCTG
GCAGAAGTCG TGGCAGCCCT ATCCCTCTTC TTCGCGCTTC CCCTTCCACA TATTTTCGTA
GTAGGCAGTG GAGATATAGC TATTGTGTTT AGCAACTATG CAAAGTATAT GTCGTTGCCC
GTGTTTGCCG TAGCTCTTTT GTTGGTGGTT GTTGAAAGGT TGGCGCTGCC TCAGAGCAGG
GCCAGAGTCT TAATGGATCT TTCTACGACT ATAGAAAAGA CTGAGAAGGC GTGA
 
Protein sequence
MDVITLLAVA LAVLVIVVGP VAVPQYATAR VEVGSFRITV GGSYYNFPQV YEPLSIVVVV 
ALLAVATYLE YLAKIKVPRL AEVVAALSLF FALPLPHIFV VGSGDIAIVF SNYAKYMSLP
VFAVALLLVV VERLALPQSR ARVLMDLSTT IEKTEKA