Gene Pcal_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2159 
Symbol 
ID4908640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1997581 
End bp1998018 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content51% 
IMG OID640125913 
Producthypothetical protein 
Protein accessionYP_001057040 
Protein GI126460762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTACAAGG CTCTGAAATC TGGGTTAAAT GTCGTAGACG CAGTCAGGAG TTTGGAGTGG 
AGAGATTTTG AGGAGCTGCT GCGTCTGATA TTTGCAGATT TTGGATACAA TGTTGCGGCG
AATGTGAGAT TGAACTGCGG CGGCATCGCC GAATTTGACC TAATAGCCTG GAATAAAGAA
TTGGCCATTG TGGTGGAAGC CAAGCGCTGG AAGGTCGGCG GTGCAAGGTG GCAAGAGGTG
GCACGGCGGC ATTTAGAGAA GATGAGGCGG TGCAAGCTAA AGCTCCTTGC CTTTGCCCCC
GCCGCGGCGC CCCTTGTAGT AACGTCCACG GCCACTAACT TTATTGCCGG CGGAGTTCCT
GTAGTCTCTA TTGAAAATGT AGGGCACTTT CTCACCTCTC TTGACTACCT CAAGGATCAA
ATCGCCATAC TTAAGTAG
 
Protein sequence
MYKALKSGLN VVDAVRSLEW RDFEELLRLI FADFGYNVAA NVRLNCGGIA EFDLIAWNKE 
LAIVVEAKRW KVGGARWQEV ARRHLEKMRR CKLKLLAFAP AAAPLVVTST ATNFIAGGVP
VVSIENVGHF LTSLDYLKDQ IAILK