Gene Pcal_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2153 
Symbol 
ID4909935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1991456 
End bp1991986 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content52% 
IMG OID640125907 
ProductSSU ribosomal protein S18P alanine acetyltransferase 
Protein accessionYP_001057034 
Protein GI126460756 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCCG AGATAGCGAT AGACGGGCCG CAGAAACTTC TTGGCAAAGA TGGTAAAACG 
GAGTATGTGA TAAGAGAGGT GACTATGCGG GATTTAAACG CGGTAATTGA GATAAACAGG
AAGGTGCTTC CGGAGAACTA CCCCCCTTGG TTCTTCGTAG AACATATTGA GCAATACCCA
AAGGCCTTCA TAGTCGCAGA GGTAGGGGGC AAAGTAGTCG GCTACGTGAT GTCGCGTGTC
GAATTTGGAT GGAGCTACAT CGCAAAGGGT AAGACGGCCA AGAAGGGCCA CATAGTCTCA
GTGGGGGTCC TGCCTGAGGC CAGGAGGCTG GGCATTGCCA CAGCCATGAT GCTTAGGGCC
CTTAAAGCGT TGAAAAACTA CTACGACACG ACTGAGGTAT ACCTAGAAGT GCGCGTGTCT
AACACGCCGG CTATTTCGCT CTATGAAAAA CTAGGCTTTA GAGTCGTGGG GAGGATCCCC
CGCTACTACA GCGACGGCGA AGATGCCTAC ATCATGGCGC GCCCACTGTA G
 
Protein sequence
MISEIAIDGP QKLLGKDGKT EYVIREVTMR DLNAVIEINR KVLPENYPPW FFVEHIEQYP 
KAFIVAEVGG KVVGYVMSRV EFGWSYIAKG KTAKKGHIVS VGVLPEARRL GIATAMMLRA
LKALKNYYDT TEVYLEVRVS NTPAISLYEK LGFRVVGRIP RYYSDGEDAY IMARPL