Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2153 |
Symbol | |
ID | 4909935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1991456 |
End bp | 1991986 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640125907 |
Product | SSU ribosomal protein S18P alanine acetyltransferase |
Protein accession | YP_001057034 |
Protein GI | 126460756 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | [TIGR01575] ribosomal-protein-alanine acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATCCG AGATAGCGAT AGACGGGCCG CAGAAACTTC TTGGCAAAGA TGGTAAAACG GAGTATGTGA TAAGAGAGGT GACTATGCGG GATTTAAACG CGGTAATTGA GATAAACAGG AAGGTGCTTC CGGAGAACTA CCCCCCTTGG TTCTTCGTAG AACATATTGA GCAATACCCA AAGGCCTTCA TAGTCGCAGA GGTAGGGGGC AAAGTAGTCG GCTACGTGAT GTCGCGTGTC GAATTTGGAT GGAGCTACAT CGCAAAGGGT AAGACGGCCA AGAAGGGCCA CATAGTCTCA GTGGGGGTCC TGCCTGAGGC CAGGAGGCTG GGCATTGCCA CAGCCATGAT GCTTAGGGCC CTTAAAGCGT TGAAAAACTA CTACGACACG ACTGAGGTAT ACCTAGAAGT GCGCGTGTCT AACACGCCGG CTATTTCGCT CTATGAAAAA CTAGGCTTTA GAGTCGTGGG GAGGATCCCC CGCTACTACA GCGACGGCGA AGATGCCTAC ATCATGGCGC GCCCACTGTA G
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Protein sequence | MISEIAIDGP QKLLGKDGKT EYVIREVTMR DLNAVIEINR KVLPENYPPW FFVEHIEQYP KAFIVAEVGG KVVGYVMSRV EFGWSYIAKG KTAKKGHIVS VGVLPEARRL GIATAMMLRA LKALKNYYDT TEVYLEVRVS NTPAISLYEK LGFRVVGRIP RYYSDGEDAY IMARPL
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