Gene Pcal_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2148 
Symbol 
ID4908405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1985504 
End bp1986217 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID640125902 
Producthypothetical protein 
Protein accessionYP_001057029 
Protein GI126460751 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTGG AATTTAGGAT CTACAAGCCT GTGGAAGACT ACGAGATCTT TGTCACAGGC 
TTTGCCGGAA TCGGCATTGT AGGCCACATA GCCACCAAGT ACATATCGAG GGGCTGCGAA
GTCGTCGGCG TGGTAAGATA CCGAGGCGAG CCCCCCATTG TGTCAATTGA GGGCGGGAGA
CTTGTGCTAC AAAACGAGAT TTTCTCCTGC GGCAGACTCG TCGGCGTGGT AAACAACTAC
GGCATACACG AGGCCGCCCT CTACGACTAC ACAAGGGCAC TGGCCAACTG GGTCGCGGCT
AACGAGTTCA AAGTGGCCGT CCTCTTCGGC GGCTTAGACG GGAGGCTGAA GAGGGGGGAC
GAGCTACTCC GCATTGTCTA CACCTCGGCC TATGAGAGGA GGGGACTACC TACGGGCGGA
GCCAAAGTGC TGGAGGCTGG GCTTCAGGTG GTGGGGCCCT TGGCCCTCCT CACCTCGTTC
TTCGAAGAGC TAGACTTCCC AGCTCTCGTA ATATTGCCCT ATGCCGACGT AACGAGGCCA
GCCGACCCAT ATGCAGCAAG CGTGGCGCTT GACTTCTTCT CAAAACTGTA CGACTACCCA
GTAAATACAA GCGGACTAAG GCAGATGGCC GAAGAGCTTG AGAGAGAGCT AGAGGAGGCG
CGTCGTAGGC TAGAAGAGCA GGCAAAGCGC GAAGAATCTA AGCTATATAT CTAG
 
Protein sequence
MRVEFRIYKP VEDYEIFVTG FAGIGIVGHI ATKYISRGCE VVGVVRYRGE PPIVSIEGGR 
LVLQNEIFSC GRLVGVVNNY GIHEAALYDY TRALANWVAA NEFKVAVLFG GLDGRLKRGD
ELLRIVYTSA YERRGLPTGG AKVLEAGLQV VGPLALLTSF FEELDFPALV ILPYADVTRP
ADPYAASVAL DFFSKLYDYP VNTSGLRQMA EELERELEEA RRRLEEQAKR EESKLYI