Gene Pcal_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2103 
Symbol 
ID4909824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1948095 
End bp1949303 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content51% 
IMG OID640125856 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_001056984 
Protein GI126460706 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1812] Archaeal S-adenosylmethionine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTCG TAGAGAAAGT TGATAAAATT CCGACGGCCA AGCGGCTTGT TGAAATAGTG 
GAGAGGAAGG GCCAAGGGCA CCCAGACTAC ATAGCAGATG GGATTTCCGA GTGGGTGAGC
CGGTACTTAT CTAGGTACTA CCTGGAGCAC TTCGGCGTAA TTCTACACCA CAACGTGGAC
AAGACTTTGG TAGTTGGCGG CCAGGCTGCG CCTAAGTTCG GCGGGGGCGA AGTTATACAG
CCCATATACA TAATAGTGTC AGGCAGAGCC ACTTCAGAAG TTAAGACAAA AGATGGGACT
GTGAAGATAC CGCTTGGAAC CATTGTGATC CAAGCCGCGC GGGATTGGCT GAAGAGCCAC
TTTCGTTTCC TAGACCCAGA CGTGCATACA ATAATCGATT ACAGAATTGG TCAAGGCTCG
GCCGATTTGG TGGGCATCTA CGACTTGGGA GTGAGGGGGG TGCCTCTCGC AAACGACACA
TCGGTCGGCG TGGGTTATGC CCCCTTGACG CCGCTTGAGG AGCTTGTGTA CAAGACGGAG
AGGTTGTTGA ATTCCCGCGA TTTTAAGTCC AAGTACCCCG AGGTTGGCGA AGACGTCAAA
GTAATGGGCG TTAGAGTGGG GAAGGAGGTC AAATTGACGG TGGCGTGCGC CATGATTAGC
CGACTTGTCA AAGATAAGAG TCACTACATC TCAGTGAAAG AGGATGTAAA ACGCGCCATT
GAAGACTTGG CGGCTAAGAT TATGCCAGAT TACAACGTGG AGGTCACCGT AAATGCGGCA
GACAAGCCGG AATACGACAT ATTCTATCTC ACGGTGACAG GCACATCGGC TGAACACGGT
GACGATGGAA TGACGGGGAG AGGCAATAAG GCAAACGGGC TCATAACCCC TATGCGCTCC
ATGTCTCTTG AAGCGGCTGC CGGGAAGAAC CCCGTCAGCC ACGTTGGCAA GATCTACAAC
GTCGTGGCGC AGAGAATCGC GGATAGGATA TACAAAGAGG TAAAAGACGT CGTAGAAGTC
TACGTGGAGG TAGTTTCGCA GATCGGCAAG CCGATAAACG AGCCCAAGAT CTTGAACGTG
GAAATATTAA GCAGTGGCGA GCTGACTGGC GAACTGCGCA GAGAAGCCGA GGCTATTGCT
AAAGAGGAAA TGGACCGAAT AACGCAGGTA ACTGAGCTAA TTCTGAGAGG CGAAGTAAGC
CTATACTAG
 
Protein sequence
MIVVEKVDKI PTAKRLVEIV ERKGQGHPDY IADGISEWVS RYLSRYYLEH FGVILHHNVD 
KTLVVGGQAA PKFGGGEVIQ PIYIIVSGRA TSEVKTKDGT VKIPLGTIVI QAARDWLKSH
FRFLDPDVHT IIDYRIGQGS ADLVGIYDLG VRGVPLANDT SVGVGYAPLT PLEELVYKTE
RLLNSRDFKS KYPEVGEDVK VMGVRVGKEV KLTVACAMIS RLVKDKSHYI SVKEDVKRAI
EDLAAKIMPD YNVEVTVNAA DKPEYDIFYL TVTGTSAEHG DDGMTGRGNK ANGLITPMRS
MSLEAAAGKN PVSHVGKIYN VVAQRIADRI YKEVKDVVEV YVEVVSQIGK PINEPKILNV
EILSSGELTG ELRREAEAIA KEEMDRITQV TELILRGEVS LY