| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2050 |
|---|
| Symbol | |
|---|
| ID | 4909965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1901745 |
|---|
| End bp | 1902740 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640125803 |
|---|
| Product | pyruvate ferredoxin oxidoreductase, beta subunit |
|---|
| Protein accession | YP_001056931 |
|---|
| Protein GI | 126460653 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.11135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGAGG AGTACGCCGG CCTCTACGAG TACGCCAACT TTGAACTGCC GCAGGAGGAG
CTGTTTCTCC CAGGCCACGG CCTATGCGCG TCGTGCACCA TAGGCGTCAT CGCTAGACAC
ATGTTAAAGG TCTTGGGGCC AGACACAGTC GTGGTGAATC CCACCGGATG CGCCGAGGTG
TCCACCGTCG TCTATCCGCG CACCAACTGG GCCGTCCCCT GGATGCACGT GGCCTTTGGT
AACGGGGGCT CTGTGGCCTC TGGCATAGAG GCCGCCATCA AGGCCTTGAA GAGGCGCGGC
GTAATTGACC CCAACAGGAA GATAAACGTC GTGGTCTTCG CAGGCGACGG CGGGACGGCG
GACATCGGGT TCCAGGCACT GAGCGGCATG CTGGAGAGGG GCCACCGGGT GATCTACATC
ATGTACGACA ACGAGGGCTA CATGAACACG GGCATACAGC GTAGCGGCAC CACGCCCCTA
GGCGCATCTA CAACGACGGC CCCCGCCGGG AGGAAGGTGC CTGGGAACGT CACTCATAAG
AAGCCCATGG CCCTCATCGC GGCGGCCCAC GGAATTCCCT ACGTGGCCAC GGCCAACCCG
GCCTACGTCC ACGACATGGT CATGAAGATA AAGAAGGCGG CGGAGGTGGA CGGCCCCTCC
TTCATACACA TACTCCAGTC GTGTACCCCA GGCTGGAGGT TTGAGCCCAA GTACGCGATA
CGGGTCTTGG AGCTGGCCAC AGAGACGGGG TACTGGGTCA ACTACGAGAT TGAAAACGGC
GAGTTTAGAG TCACGATACC CGTCCCCAAG AGGAAGCCGG TGAAGTGCTT CTTACAGCTA
CAGGGCAGGT TCAAGCACTT GAAGCCAGAG GAGATAGACA TGATACAGGC CATCATTGAC
AGAGACGTGG CCGAGATAAA TAGAATGGTG GGCAGAGAGG TGATAGGCCC CGTGGACCCA
AGCCTCCCCT GCATGACGCC GCGGGGCGCT AAATGA
|
|---|
| Protein sequence | MAEEYAGLYE YANFELPQEE LFLPGHGLCA SCTIGVIARH MLKVLGPDTV VVNPTGCAEV
STVVYPRTNW AVPWMHVAFG NGGSVASGIE AAIKALKRRG VIDPNRKINV VVFAGDGGTA
DIGFQALSGM LERGHRVIYI MYDNEGYMNT GIQRSGTTPL GASTTTAPAG RKVPGNVTHK
KPMALIAAAH GIPYVATANP AYVHDMVMKI KKAAEVDGPS FIHILQSCTP GWRFEPKYAI
RVLELATETG YWVNYEIENG EFRVTIPVPK RKPVKCFLQL QGRFKHLKPE EIDMIQAIID
RDVAEINRMV GREVIGPVDP SLPCMTPRGA K
|
|---|
| |