| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2008 |
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| Symbol | |
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| ID | 4908439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1864387 |
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| End bp | 1864998 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125760 |
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| Product | proteasome endopeptidase complex |
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| Protein accession | YP_001056889 |
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| Protein GI | 126460611 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.177612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAGAGG AGGTGTCTAT AGGCGCCACA GCGGTGGGCA TAAAGACTAA GGAGGGCGTA
GTGCTCGCCG CGGAGAAAAG GGTCTCCTAC GGATTCTATA CGCTTAGCAC GGCGGGGAAG
AAGGTGTTCA TTGTAAACGA CAGGCTGGCC ATAGCGTCGG CGGGCATCAT CGCCGACATG
CAGACGCTGG CCAAGATCCT CAAATTAAAC GCAAAGGCGT ATGAGCTTGA GATGAAGAGG
AAGCCCTCGG TGCATGCCAT GGCCAAGTTG CTGTCTGTGG TGATGTTCTC TAGGCGGTTT
ATGCCGTTCT TCGCCGAGGT GCTCGTCGGC GGCATAGACG ACGAGGGGCC CCACCTCATC
GTCATGGACC CCCTGGGCAG CCTCATCGAG GACAACTACG CGGCGTTGGG CACCGGGGCG
AAGCTCGCGA TTGCCATAAT AGACGCCTCG TATAAGCCAG ACATGTCGCT CCAAGACGCA
AAGAAGCTCG CCGTCCAAGC ACTCAAGGCG GCGCTGGAGC GGGACCCAGT CTCAGGCGGC
GGGATAGACC TAGTGGTAAT AGACAAAAAC GGGGCGAGGG AGGAGGAGGT AAAATTGCAG
GTTTTGATTT AG
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| Protein sequence | MGEEVSIGAT AVGIKTKEGV VLAAEKRVSY GFYTLSTAGK KVFIVNDRLA IASAGIIADM
QTLAKILKLN AKAYELEMKR KPSVHAMAKL LSVVMFSRRF MPFFAEVLVG GIDDEGPHLI
VMDPLGSLIE DNYAALGTGA KLAIAIIDAS YKPDMSLQDA KKLAVQALKA ALERDPVSGG
GIDLVVIDKN GAREEEVKLQ VLI
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