| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1948 |
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| Symbol | |
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| ID | 4909741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1812405 |
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| End bp | 1813151 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640125699 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001056830 |
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| Protein GI | 126460552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC GGTCTCTTAT CCTACTCGCA GTAGCCATAG TTCTCCCCTT TGTCGTCGCC
CTCGTCATGC AGTCTGGACA GACCACCGCC GAGGAGCACA GCGGCCTATT TGAGCGGATT
GTCCCCACGT GCTACATCCC AGGCCAGGAG CCAGCCGCCG CCGACTTTAC CCTAGTAGAC
CAGTTCAACC GCACCGTCAC TCTCTCAGAG CTCTGGTCTA GGCCCGTCCT AATCACCTTC
ACCTACAGCT GGTGCCCAGA CGTGTGCCCC ACAATGCACC TCGTCCTCAA CCGCACTCTG
CCGATGATAA GGGGCTATAT AGGGGCTGTC TTAGACGTCT CTCTAGACCC CGAGAGAGAT
ACGCCAAGGC GCCTATATGC ATATTCGACG GGCAATAGGT ACAACTGGAC TTTTCTCACA
GGCGACCCGA AGACACTGGA GAGAGTGTGG TCGGCATACG GCGTCTATAG GTACGTGGAA
CAGAGACCCA CAGGCCCCTA CATAGTCCAC AGCGTAGACT GGATCGTGGT AAAAGACGGA
AAAATCCTAG GCAGAGTAAG AGGCCTCCCA TCCCCAGAAA CCCTCGCCAA GTACCTAATA
GACATAGCAG AGAGAAGGTG CGGCTACTCC GCTCCCACGC CGACGTCACA GCCCACGACG
GCAACACCTC CTGCCATCTC TACCACGTTG ATCATGATCA CGGCCGTCGG CGCAGCTGTC
GTGGCGGCTT TGGCTAAGAG GAGATAG
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| Protein sequence | MSTRSLILLA VAIVLPFVVA LVMQSGQTTA EEHSGLFERI VPTCYIPGQE PAAADFTLVD
QFNRTVTLSE LWSRPVLITF TYSWCPDVCP TMHLVLNRTL PMIRGYIGAV LDVSLDPERD
TPRRLYAYST GNRYNWTFLT GDPKTLERVW SAYGVYRYVE QRPTGPYIVH SVDWIVVKDG
KILGRVRGLP SPETLAKYLI DIAERRCGYS APTPTSQPTT ATPPAISTTL IMITAVGAAV
VAALAKRR
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