| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1923 |
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| Symbol | ubiA |
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| ID | 4908263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1790680 |
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| End bp | 1791519 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640125674 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001056805 |
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| Protein GI | 126460527 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTGAAGG CGTATCTGAC TTTGTTAAAG CCGAGGGTCA TTTGGCTTTT AATTTTGGCC
AGCGCAGCTG GGTACGTATA CGCCGCGGGG GGCGTGGATT GGGGCAAGCT GTCTTCTCTT
CTCTTGGCGG CTCTCTTGGC CACGGGCGGC TCTGCCGCGT TTAACCACTA CTGGGAGCGT
GACATAGACG CGGCAATGCG GCGCACGTCT CGTAGGCCTC TTCCAATGGG CCTAATTAAG
CCGGGCAGGG CTTTGGCCTT TTCTCTGGCG CTCTCCGCGG CCGGCGTTGC CCTGGGCTTC
CTCCTGCTGG GCCCGTTGCC GGGGGCCTTC GTGGCCTTGG GCTGGTTCTT CTACGCCGTG
GTGTACACCA TGTGGCTTAA GAGGAGGAGC TGGCTAAACG TCTTGGCAGG GGGATTCGCC
GGGAACGCGG TTTTTCTAGG CGGATATGCG CTGGGAAAGG GCCACATAGA CCTCGCCGCA
GTGTTAATGT CCTTTGCCGT GTATCTCTGG ATCCCGGCGC ACATATGGTC TCTGGCCTAC
AAGTACAAAG AGGACTACAG AAGGGCTGGC GTCCCCATGC TTCCTGTCGT AATTGGCGAG
CAGAAGGCTG TCGTCGTGAT ATCTGTCTTG AACGTGGCAA GTGTCGCCTA TATAGCACTT
TTGACGTTGC TCTTTTTGCC CTCCCTCTTG TCCTTGTTGC TAGTCGCCGT GGGCGCGGGG
GCGGCCGTTG CGTCGAGTAT ATACGCGCTG GTGAAGAGGA CTGAGGGAGC CATGTGGAAG
ATGTATAAAT CCTCGGCCCC CGTCTTGACG ATATTCTTGG TCGCAGTAAT GCTGGCCTAG
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| Protein sequence | MVKAYLTLLK PRVIWLLILA SAAGYVYAAG GVDWGKLSSL LLAALLATGG SAAFNHYWER
DIDAAMRRTS RRPLPMGLIK PGRALAFSLA LSAAGVALGF LLLGPLPGAF VALGWFFYAV
VYTMWLKRRS WLNVLAGGFA GNAVFLGGYA LGKGHIDLAA VLMSFAVYLW IPAHIWSLAY
KYKEDYRRAG VPMLPVVIGE QKAVVVISVL NVASVAYIAL LTLLFLPSLL SLLLVAVGAG
AAVASSIYAL VKRTEGAMWK MYKSSAPVLT IFLVAVMLA
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