Gene Pcal_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1790 
Symbol 
ID4908982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp1659227 
End bp1659892 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content57% 
IMG OID640125539 
Productphosphoenolpyruvate synthase 
Protein accessionYP_001056673 
Protein GI126460395 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0241449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGTAA TAATAAATGA GGTAAGAGAC ACGGGGGCCT TCGTGGCGTA CGACGTGGTT 
AAAGGAGTTG ACAATAGGGA GTACCCGCCG CCTCTAGTGG AGGAGATTCA GAGAGCGGTG 
GACGAGGCAA GGTCGTCGCT CTCCTTAGAC ACGTTGAAGG ACCACCCGGT GATTAGGGCC 
TACCGCGACT TCTACTGGAG AGTGGTGAAG ATAGATCCTA CAAAACAGAG ACCAGCGCAA 
GAGGCGCTTC TGCGCCGCGT TCTACGCGGC GAGGCGCTTC CCAGGATTAG CCCAGTCGTG 
GACGCGGGCA ACGCCGCGTC GATAAAGTTT CTAGTTCCCA TAGGCCTTTA CGACTTGGCC 
AAGGTCAAGG GCGAGGTCTT GCGGCTGAGG TGGTCGAAGA GGGGCGAGGT GTTTTACCCC 
ATAGGCGGCT CCCCCGTGGA GCTCGACAGC CAGATAGTGC TGGCGGCTGA TGGGCAAATA 
CTCCACTTAT ACCCATATAG AGACAGCGTA GAGACAAAAA TCGAGCGCGA TACCAGAGAC 
GTGTTAGTAG TGGTGGCAGG GGTTCCCGGG GTGGAGCTGT CGAGGCTGAT AGACGCCGCT 
TTATACCTGC GGAAACTCTT TTCGTTGCTA GGCGGAGTAG CAGAAGGCGA GGTGCAAATC 
GCCTAG
 
Protein sequence
MVVIINEVRD TGAFVAYDVV KGVDNREYPP PLVEEIQRAV DEARSSLSLD TLKDHPVIRA 
YRDFYWRVVK IDPTKQRPAQ EALLRRVLRG EALPRISPVV DAGNAASIKF LVPIGLYDLA 
KVKGEVLRLR WSKRGEVFYP IGGSPVELDS QIVLAADGQI LHLYPYRDSV ETKIERDTRD 
VLVVVAGVPG VELSRLIDAA LYLRKLFSLL GGVAEGEVQI A