Gene Pcal_1777 details

Gene Information

• Locus tag: Pcal_1777
• Symbol: pyrE
• ID: 4909606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1648157
• End bp: 1648735
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640125526
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_001056660
• Protein GI: 126460382
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 3
• Fosmid unclonability p-value: 0.0000000386496
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGAAGGCGT TAATTGACGC TGGCGTCGTC AAATTTGGAA GATTTGTCCT CTCTAGCGGC 
ATTGAGAGCC CTTTTTACGT AGATTTGCGG AGGGCCTTGG GGCACCCGGA CTTAGTCAAG 
TGGGTGGTCT CGGGATACCT CTCTGCGCTC TCTAGGCTAA AGTTCGACGT TTTGCTGGGA 
GTTGCCACTG GGGGAATACC CTACGCCTCC ATTTTGGGCT ACCTTCTACA AAAGCCGTTT 
GGATATGTGA GAGCAGGGGC CAAGGGCTAT GGAACAATGC AGGCCGTCGA GGGGGCAGAT 
GTGGCGGGGC TAGCCGCGGT TGTTGTAGAC GACGTGTTGA CCACTGGGAA TAGCTTGATA 
AACGCCATAA AAGCCGTCAG AGAGGCCGGG GGCGAGGTGG TGGGCGCCTT GGTGTTCCTA 
GACAGAGAGC AGTGCGGGTC GCAAAACGTT AGGAGAGAGA CGGGAGTGGA GGTCTTCAGT 
GTGTATAAGA TGAGGGAGCT TTTGGAGACA TTGAAGCCGT ATATCGGGGA GGGGCACTAC 
CGCGCCGCGG TTGAATACTT GGCTAAATGG TCTTGTTAA 

 

Protein sequence

MKALIDAGVV KFGRFVLSSG IESPFYVDLR RALGHPDLVK WVVSGYLSAL SRLKFDVLLG 
VATGGIPYAS ILGYLLQKPF GYVRAGAKGY GTMQAVEGAD VAGLAAVVVD DVLTTGNSLI 
NAIKAVREAG GEVVGALVFL DREQCGSQNV RRETGVEVFS VYKMRELLET LKPYIGEGHY 
RAAVEYLAKW SC