Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1767 |
Symbol | |
ID | 4909575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1639871 |
End bp | 1640431 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640125514 |
Product | pyruvate/ketoisovalerate oxidoreductase, gamma subunit |
Protein accession | YP_001056650 |
Protein GI | 126460372 |
COG category | [C] Energy production and conversion |
COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000123758 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTACGAGG TGGTGTTCCT TGGGCGGGGC GGACAGGGCG CGGTTACGGC CGCGCAACTT CTAGCCTACG CGGCTACGTT GGAGGGAAAG AAGGCACAGG CGTTGCCAGA GTTTGGGGCC GAGCGCAGGG GAGCCATTGT GAGGGCGTAT CTCAGGTTTG GGGAAACTCT TCTCCACTCC TCAGTAAAAG AGGCAGACTA CGTCGTGGTA CTAGACGGGA GAATACTAGA GCAGATAGAC GTGAGGCGGT ATGGCAAACC TGGCGCAGTT TACATAGTAA ACACAAAGTC CAAAGCCGAG TGGTACATAG GCATAGACGC GACAGCCATA GCGCTGAAAT ACGGCCTAGT GGTCGCCGGG TGGCCCGTTG TAAATCTCAT CATGGCCTCG GCTTTTGCGG CAGTTAGCAG GCTTGTCTCA CTAAAGAGCA TTATTGATGC AGTGCCCGTA TTTGTGCCTA AGAAGTACAT AGAACCTAAT GTAAAAGCCG TGGAGGAGGC CTATAGGACT GTGGAAGAGC TGTTGAAATC TCAGGGCCAG CGCCCTGCGT CAATCGCGTA G
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Protein sequence | MYEVVFLGRG GQGAVTAAQL LAYAATLEGK KAQALPEFGA ERRGAIVRAY LRFGETLLHS SVKEADYVVV LDGRILEQID VRRYGKPGAV YIVNTKSKAE WYIGIDATAI ALKYGLVVAG WPVVNLIMAS AFAAVSRLVS LKSIIDAVPV FVPKKYIEPN VKAVEEAYRT VEELLKSQGQ RPASIA
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