Gene Pcal_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1767 
Symbol 
ID4909575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1639871 
End bp1640431 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content55% 
IMG OID640125514 
Productpyruvate/ketoisovalerate oxidoreductase, gamma subunit 
Protein accessionYP_001056650 
Protein GI126460372 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000123758 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTACGAGG TGGTGTTCCT TGGGCGGGGC GGACAGGGCG CGGTTACGGC CGCGCAACTT 
CTAGCCTACG CGGCTACGTT GGAGGGAAAG AAGGCACAGG CGTTGCCAGA GTTTGGGGCC
GAGCGCAGGG GAGCCATTGT GAGGGCGTAT CTCAGGTTTG GGGAAACTCT TCTCCACTCC
TCAGTAAAAG AGGCAGACTA CGTCGTGGTA CTAGACGGGA GAATACTAGA GCAGATAGAC
GTGAGGCGGT ATGGCAAACC TGGCGCAGTT TACATAGTAA ACACAAAGTC CAAAGCCGAG
TGGTACATAG GCATAGACGC GACAGCCATA GCGCTGAAAT ACGGCCTAGT GGTCGCCGGG
TGGCCCGTTG TAAATCTCAT CATGGCCTCG GCTTTTGCGG CAGTTAGCAG GCTTGTCTCA
CTAAAGAGCA TTATTGATGC AGTGCCCGTA TTTGTGCCTA AGAAGTACAT AGAACCTAAT
GTAAAAGCCG TGGAGGAGGC CTATAGGACT GTGGAAGAGC TGTTGAAATC TCAGGGCCAG
CGCCCTGCGT CAATCGCGTA G
 
Protein sequence
MYEVVFLGRG GQGAVTAAQL LAYAATLEGK KAQALPEFGA ERRGAIVRAY LRFGETLLHS 
SVKEADYVVV LDGRILEQID VRRYGKPGAV YIVNTKSKAE WYIGIDATAI ALKYGLVVAG
WPVVNLIMAS AFAAVSRLVS LKSIIDAVPV FVPKKYIEPN VKAVEEAYRT VEELLKSQGQ
RPASIA