Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1731 |
Symbol | |
ID | 4909518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1613528 |
End bp | 1613821 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640125478 |
Product | signal recognition particle, subunit SRP19 (srp19) |
Protein accession | YP_001056614 |
Protein GI | 126460336 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1400] Signal recognition particle 19 kDa protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.583276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAA GGGGAGGCCG AATCCTCTGG CTTGTATACC TAGACTCCAC AATACCCAAA TCCAGAGGCA GAATAATCGC AAAAGGCGTC GCAGTTCCCA AGCCCACGAT ACAAGAGGTA GAGGAGGCCT TGAGAAGACT GGGCTACAGC TACGAGTCCT ACCCCGAGAA GAAGTACCCC CCGCTTTGGT TTGAAGAACG GGCGCGCGGC TATTTCCTAG TGAAAAGCGA CGAGAAGCCG GCCTCCATAG CGGCCAAGGT GGCTGAGGAA ATAAGGAGAA TAAGAGGGCA GTAG
|
Protein sequence | MKKRGGRILW LVYLDSTIPK SRGRIIAKGV AVPKPTIQEV EEALRRLGYS YESYPEKKYP PLWFEERARG YFLVKSDEKP ASIAAKVAEE IRRIRGQ
|
| |