Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1659 |
Symbol | |
ID | 4908642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1549045 |
End bp | 1550244 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640125406 |
Product | 2-aminoadipate aminotransferase |
Protein accession | YP_001056542 |
Protein GI | 126460264 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0665896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG GCAAGCTTCT GGCGGAGCGT ACCAAGTATA TGACCGCCAG CGAGATTAGG GAGTTGCTCA AGTGGGCGAC CGTGGACGTG ATTTCGTTTG GAGGGGGCAT GCCGGACCCC TCCACGTTCC CCGTGGAGGA TATCCAAAAG ATCGTCAACT ATGTCCTCGA GGCGTATCCA CACAAGGCCC TCCAGTATGG GTCAACTGAG GGAGTCTACG AGCTACGCCA AGAAATTGCA AAATTTAGCG AGGAGCACCA CGGAATTAAG ACCAAGGCTG AGAACGTCCT TGTGACAGTG GGGTCGCAGG AGGCGCTGGA GTTGCTCGGC CGCGTTTTTA TAAACCCCGG CGACGTGGTT ATTACAGAGA ACCCGACCTA CCTGGCCGCG TTGCAGGCGT GGCGCGTGTA CCAGCCCAAG CTAGTGGGCA TACCGATGGA CGAGCACGGC ATGATTGTAG AGCTGTTAGA GGACAAGGTG AGGGAGCTGT TGGCCAGGGG CGAGAGGATA AAATTCATCT ACACGATCCC CACGGCGCAG AACCCCACTG GCATTACAAT GACGCAGGAC AGGCGCAAGT ACCTCCTAGA GGTGGCGGAG CGGTACGACT TACTCATCGT GGAAGACGAC CCCTACTCCT ACTTCCTCTT TGAGCCTATA CAAGTGGCCC CAATAAAGGC GTTGGACAAG TCGGATAGAG TGATCTACCT CTCCACGGCG TCTAAGATTT TTGCGCCGGG CTTCCGCCTC GGCTGGGTTG TGGCGAGTGA GGAGGTGATT AAGTGGTTCT ACTTGGCCAA GCAGTCGCTT AACTTAAACA CCTCGAACTT TGTGCAATAC ATATTCTTGG AGGGGCTTAG GCGCGGCGTG GTGACTAAAA ATCTGCCGCG GGTTAAAGAG CTATACAAGA GGAAGCGCGA CGCCATGTTG GCTGCCTTGG AGACCTACAT GCCTGAAGGC GTGAGGTGGA CCCGGCCCTC GGGCGGCATG TTCGTATGGG CCACCGTCCC GCCGCAGATA GACACGCGGG AGCTGTTGCG CAAGGCCGTC ACCCAGTACA AGGTGGCCTT TATCCCTGGC CACGGCTTCT TCGTCGACGA GTCTGTCAAA AACGCCATGA GGCTAAACTT CACCTACCCC TCTTTTGAGC AAATAAACGA GGGCATCCGC CGCCTCGCTC TGGCAATTAA AGAGGCATGA
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Protein sequence | MDIGKLLAER TKYMTASEIR ELLKWATVDV ISFGGGMPDP STFPVEDIQK IVNYVLEAYP HKALQYGSTE GVYELRQEIA KFSEEHHGIK TKAENVLVTV GSQEALELLG RVFINPGDVV ITENPTYLAA LQAWRVYQPK LVGIPMDEHG MIVELLEDKV RELLARGERI KFIYTIPTAQ NPTGITMTQD RRKYLLEVAE RYDLLIVEDD PYSYFLFEPI QVAPIKALDK SDRVIYLSTA SKIFAPGFRL GWVVASEEVI KWFYLAKQSL NLNTSNFVQY IFLEGLRRGV VTKNLPRVKE LYKRKRDAML AALETYMPEG VRWTRPSGGM FVWATVPPQI DTRELLRKAV TQYKVAFIPG HGFFVDESVK NAMRLNFTYP SFEQINEGIR RLALAIKEA
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