Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1649 |
Symbol | valS |
ID | 4910227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1537191 |
End bp | 1539590 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640125396 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001056532 |
Protein GI | 126460254 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.737664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCTCCA AATTGCCCAC TAGGTGGGAC ATACGTTGGG AGGAGGAGCT AATAGCCACA TGGGAGAAAG AGGGGCGCTT CAAGACCAAG GTTAGGGGGG ATAGGCCGGT GTTTGTAATA GACACGCCGC CGCCCTATCT GTCTAGCAAT AGACCCCACA TAGGCCAGAC GGCGTCGTAC GCCCACTTCG ACATGATTGC GAGATTTCTC AGAATGAGGG GAGTCGACGT GGTTTTCCCC TTCTACCTCG ACAGAAACGG CCTCCCCATA GAGGTGCAGG TGGAGAAGAA GTACGGCATC GTCGCGCATG AAGTGCCCAG GGAGCAGTTC ATAAAGCTGT GTAAAGAGGA GCTGGACCGC TACGAGGGCG AGTTTGTCTC GTCGCTTAGG AGGTGGGGCC TCTCCTTCGA CTACTGGCCG CAGGGGACCG ACAGCCCGGA GTACCGGAGG ATGACGCAGA AGACCTTCAT AGATCTGTGG CACAGGGGGT TGGTGTACGA GGCGGAGCGG CCTACCCCCT GGTGTCCACG TTGCCGCACC GCCCTAGCCG AGCCGGAGAT AGAGTACAAG GAGGAGGAGA CCTACCTCAA CTACATAAAG TTCAGGGTCA AGGAGACCGG CGAGGACATA GTCATAGCCA CGACGAGGCC TGAGCTACTT CCAGCCACAG TCGCCGTCAT ATTCCACCCA GAGGATGACA GGTATAAACG CCTCGAGGGC CTGCACGCGG TTGTGCCGCC CGAGGGGCAG GTAGTCCCCA TTCTCCCCCA CAGAGCCGCC AATCCGAAGT TCGGCACAGG GCTTGTCATG ATATCCACCT TCGGCGACAC TAGAGACCTA ATGATAGTGA ACGAGCTCAA GTTGCCCATC CGGATCGTGG TAGACGAGGC GGGGAGAATA AAGGAGGGTC GGTACGCGGG GCTCACAGTG AGAGAAGCAA GGGCGAAGAT AGTCGAAGAC CTAAAGAGAG AGGGCCTCTT GGTTAAACAA GAGAGGCTTG TCCACAACGT GCCGGTGTGT TGGCGCTGTA AGACTCCGCT TGAAATTATT GTAACAAGGG AGCTCTTCAT AAGGCAGGTG GAATTCAAGG AAAAACTGGT AGAGCTGGCC CAGAGAATGG AGTTTAAGCC GCCTGAGTAC CGCCAAGTCT TAATAGACTG GATACGCTCC CTCGAGCTAG ATTGGCCAGT GTCCCGGAGG AGGTACTATG CCACCGAGAT ACCCATCTGG TGGTGTATAA AGCCAAATGG GGAACGCGTG CCCATTTTGC CAAAGGGCGG AGAGTACTAC GTGCCTTGGA GACAGGAGCC GCCGCCGGAG GTAAAGGAGC AGTGCAAAGA CGGCGTGCTC GAGGGCGACA CCCGCGTCTT TGACACGTGG ATGGACTCCT CCATCTCCTG GATGTACGCC TCGGGAGTCA CCAAGGAGTT CAACGTCTTC CCCAAGGTCT ACCCCCACTC CATCATGAGG CCGCAGGGCT ACGACATTAT TAGGACGTGG CTCTACTACT CGCTACTAAG GGCATTCCTA CTATTCGGCG ACATACCCTT CAAGTACGTG AGAATAAACG GCATGGGGCT AGACGAGAAG GGCGAGGCCA TGCACAAGTC GAAGGGGAAT GTGATCGACC TCCTAGCCCC AGTGGAGAAA TACGGCGCAG ACGCGGTGAG GTTCTGGGCG GCTGCCGCGG GCAAACTTGG CAGCGACTAC CGGTACAACG AAAACGTAAT ACGGGAGGGA AAGGAGTTTG TGACAAAGGT CTGGAACATC GCCCGCTTCG TCACCTCGTT CCCAAAGCCG CAGGGAACGC CCAGCCTCAC CCCAGTGGAC AAGGCAATTT TGGCCAAGCT ATACGACGTG GCCAAGAGGG CCATAGCCGC CTACAGCGAC TTCGACGTAT ACGAGCCGGC GCACCTCCTC TACAACTTCA TCTGGCACGA ATTCGCAGAC CACTACATCG AACTGGCGAA GTCCAGGGCG TACAACAGAG GCGGCGAATT CGCCAAAGAA GAACAGGAGG CGGCAATTTA CACGCTTCAC ACAGTCATGG CGTACAGCTT CAAACTACTG GCCCCAATAA TGCCCTTTGT CACAGATAAA ATCTGGAGAG AGGTCTACGG CCGCTCAATA CACGACGAGG CGATAGAAGA CCCGCCCGAG GCGTGGCGGG AGGGCGACGC CCAGCTATTC GACATGGTGA AGGCGATAAA CAGCGCAGTG TGGCGCTACA AGAACAGGAA GGGGCTCAGT CTGGCAGACC CCCTGGACAG GCCGCTCTGC GTCCCCGAAA AGGCGCTAGC CGCCTCGAAA GACCTCAAGT ATACGCATAA GGTGCCCGAG GTAAAAGCCG GCCCCTGCAA AGAGCCAATA GACGAGGAAG GCCTCGCCTC CCTCGACTGA
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Protein sequence | MVSKLPTRWD IRWEEELIAT WEKEGRFKTK VRGDRPVFVI DTPPPYLSSN RPHIGQTASY AHFDMIARFL RMRGVDVVFP FYLDRNGLPI EVQVEKKYGI VAHEVPREQF IKLCKEELDR YEGEFVSSLR RWGLSFDYWP QGTDSPEYRR MTQKTFIDLW HRGLVYEAER PTPWCPRCRT ALAEPEIEYK EEETYLNYIK FRVKETGEDI VIATTRPELL PATVAVIFHP EDDRYKRLEG LHAVVPPEGQ VVPILPHRAA NPKFGTGLVM ISTFGDTRDL MIVNELKLPI RIVVDEAGRI KEGRYAGLTV REARAKIVED LKREGLLVKQ ERLVHNVPVC WRCKTPLEII VTRELFIRQV EFKEKLVELA QRMEFKPPEY RQVLIDWIRS LELDWPVSRR RYYATEIPIW WCIKPNGERV PILPKGGEYY VPWRQEPPPE VKEQCKDGVL EGDTRVFDTW MDSSISWMYA SGVTKEFNVF PKVYPHSIMR PQGYDIIRTW LYYSLLRAFL LFGDIPFKYV RINGMGLDEK GEAMHKSKGN VIDLLAPVEK YGADAVRFWA AAAGKLGSDY RYNENVIREG KEFVTKVWNI ARFVTSFPKP QGTPSLTPVD KAILAKLYDV AKRAIAAYSD FDVYEPAHLL YNFIWHEFAD HYIELAKSRA YNRGGEFAKE EQEAAIYTLH TVMAYSFKLL APIMPFVTDK IWREVYGRSI HDEAIEDPPE AWREGDAQLF DMVKAINSAV WRYKNRKGLS LADPLDRPLC VPEKALAASK DLKYTHKVPE VKAGPCKEPI DEEGLASLD
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