| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1558 |
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| Symbol | |
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| ID | 4909954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1450888 |
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| End bp | 1451496 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125306 |
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| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
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| Protein accession | YP_001056442 |
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| Protein GI | 126460164 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
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| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCATATCC CCGACGGGTG GCTTGACCCA TATTTGGCTG GTGCCACGTG GCTTATTGCG
GCGGCCTATC TCGTTTTTAT GGTTAGGAAG ATTCCTAGGG AGAGGTGGCA GGTAATTGCG
CCTGTTGCTG GGGCCATATT TGTGGCTCAG ATGTTGAACT GGCCTATTCC AGGGGGCACC
TCTCTGCACT TCGTGGGCGG GGCATTCGCC GCTATTTATC TTGGGAACGC GTGGGAGGGC
TCCGCCGTCA TTTCCCTCGT CTTGGCTGTG CAGACTTTGT TGTTCCACGA CGGCGGAATT
ACCGCTTACG GCGCCAATTT CATAAACATG GGAATAGTGG CGCCGTGGGT CGGCCTCCTT
ATATACAGGG CGTTGCAAAA TAGGCCTCGC ATAGCAAGTT TTTTTGCGGG ATGGATGAGC
TTGTTTTTGG CGGGGTGTGC CGCGGGCATT GAAATCGGCG TAATGCCGAC AGTGGGATAC
CCGCTGTCTG TCACTCTGCC GGCCATGGCC GTGCCGCACT TCCTCCTCGG CATTGTCGAA
GGCGTTTTAA CGTCAGCTGT TTTGACGACC ATGGAAAGAT TACACGTGTA CGCATTTCCC
AGGCTATGA
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| Protein sequence | MHIPDGWLDP YLAGATWLIA AAYLVFMVRK IPRERWQVIA PVAGAIFVAQ MLNWPIPGGT
SLHFVGGAFA AIYLGNAWEG SAVISLVLAV QTLLFHDGGI TAYGANFINM GIVAPWVGLL
IYRALQNRPR IASFFAGWMS LFLAGCAAGI EIGVMPTVGY PLSVTLPAMA VPHFLLGIVE
GVLTSAVLTT MERLHVYAFP RL
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