Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1520 |
Symbol | |
ID | 4908620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1420284 |
End bp | 1421789 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640125269 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_001056405 |
Protein GI | 126460127 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000211008 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCATCT CTTCTCTGGA GATGTATGTG GCGGATCGTA ATGCCGAGTG GCTTGGGGTG CCGCGGCTTG TGCTTATGGA GAACGCCGGG GCGGCTGTGG CTAGGAACCT TCTGCGGAAG TTTCCCAACG CGTCAAACGT CCTGGTGGTG TGTGGCACTG GTGACAACGG CGGTGATGGC TACGTCGCGG CGCGGCACCT CCACGCGGCT GGGAAGAGGG TGAGGGTGGT GGGGCTGGGC GAGCCAAGGG AGGAGCTGGC GAGGGTCAAC TTCGAGGCTG TGAGGAGGCT GTGGGGGGTG GAGCTGGCGG TGGTCCGCGA CGTGTTGGAG CTGTTGGCTT TGCAGGACTG GTTCCTCTGG GCTGACGTCA TTGTAGACGC CGTGTTGGGG ACGGGGATTA GGGGTGTGTT GAGGGAGCCG CAGGCCACCG CCATTGACCT CATGAACGCC GCGGCGGCGC CTAAGGTGGC TGTGGATGTG CCAAGCGGCC TTGACCCAGA CACGGGGGAG GTGAGAGACA AGGCCGTCAA GGCCGCGCTG ACGGTCACTT TCCACAAGGC TAAGAGGGGC CTCTTGGCGC CTGGCGCCGA GAGGTACGTG GGGGAGCTTG TGGTGGAGCC CATCGGCATC CCGCCTGAGG CTGAGCTGGT GGTGGGGCCG GGGGACTTCG CCTACCTCAA CTTCTCTAGG CGGGCTGACT CTAAGAAGGG GGACCACGGG AGGGTGCTGG TGGTTGGGGG CTCGTTGGAG TACTCGGGGG CCCCCGTCTA CGTGGCTAAG GCCGCTCTGA GAGGCGGCGT GGACTTGGCA GTGGTGGCGG CGCCCGAGCC GGCGGCCTAC GCGGCCAAGG CGCAGGGCCC TGAGGTCATC GCCATACCCC TCGAGGGGGC CCGCCTCTCC CTCAAACACG TGGACAAGCT GGCGTCTCTT GCGGAGCGGT TCGACGTAGT GGCCATGGGG CCCGGCCTTG GGACTGAGGG AGAGACGCCA GACGCCGTGC GCGAGCTGTT CAACAAGCTG GCCGGGAGGA AGCCGCTGGT GGTAGACGCA GACGCGATAA AGGCGCTTAG GGGAGTGGAG GCGAGGGGTG TCGTGGTCTT TACTCCGCAC GCGGGGGAGT TCAAGGCGCT CACCGGCGTG GAGCCCCCCG CAGATCTGAG GGCTAGGGCC GAGGTGGTGA AGGAGTGGGC GGCGCGGCTC GGAGGCGCGG TCATCCTCCT CAAGGGCAGG TTCGACGTGG CCTCAGACGG GCAGAGGGTT AAGATAAACG CCACGGGGAC ACCTGCAATG ACCGTGGGGG GCACTGGCGA CGTGCTCACG GGCCTTGTGG CGGCCTTCCT CACCAAGTCC AAGGACCCCC TAGAGGCGGC GGCGGTTGCC GCCTTCGTCA ACGGCCTCGC TGGCGAAGAG GCGGCGGCTC AGCTGGGCTT CCACATAACA GCCACAGACC TCCTAGACCG CATCCCCGGC GTAGTCAAGA GGTTTGCGAG AGAGCAGGTG GTTTAA
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Protein sequence | MAISSLEMYV ADRNAEWLGV PRLVLMENAG AAVARNLLRK FPNASNVLVV CGTGDNGGDG YVAARHLHAA GKRVRVVGLG EPREELARVN FEAVRRLWGV ELAVVRDVLE LLALQDWFLW ADVIVDAVLG TGIRGVLREP QATAIDLMNA AAAPKVAVDV PSGLDPDTGE VRDKAVKAAL TVTFHKAKRG LLAPGAERYV GELVVEPIGI PPEAELVVGP GDFAYLNFSR RADSKKGDHG RVLVVGGSLE YSGAPVYVAK AALRGGVDLA VVAAPEPAAY AAKAQGPEVI AIPLEGARLS LKHVDKLASL AERFDVVAMG PGLGTEGETP DAVRELFNKL AGRKPLVVDA DAIKALRGVE ARGVVVFTPH AGEFKALTGV EPPADLRARA EVVKEWAARL GGAVILLKGR FDVASDGQRV KINATGTPAM TVGGTGDVLT GLVAAFLTKS KDPLEAAAVA AFVNGLAGEE AAAQLGFHIT ATDLLDRIPG VVKRFAREQV V
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