Gene Pcal_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1519 
Symbol 
ID4909351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1418696 
End bp1420003 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content62% 
IMG OID640125268 
Productperiplasmic binding protein 
Protein accessionYP_001056404 
Protein GI126460126 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.88293e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTCAAA AAATTACGCT GGGACTAGCC GCGGCTGCGT TGTTAATCTC CATACTGGCA 
GTGGCGCTGG CCTGGTCCAC CTCGGCTAAG GTCGAGGAGG CGCTCCACGC GACGGGGCAG
GAGCTGGGGG CTCTCACATC TGCCGTAAAG TCGCTGAACT CCACCCTCGC CTCTCTGGCG
TCTGGGGTTG AGCAGAGGCT GGCCAACGTG GAGAGGGAGG CCGCCGCGGC GAAAAACGCC
ACGGCCATTC TGCTAAAGGC CGCCCAGGCC CCCGCCGGCG AGGTGCCGGT CAAGTACGCC
AAGCTGTTCT CCATAAGGTA CGAGGGGGGC TACTACGTGC TGAGGGACGC CCTCGGCAGG
ACGATACTCC TCGCCCCCAG GGGCGCGGGC CCGGCCCTCA CAAAGTTCTA CGTGGATAAG
TACAAGCCAG CCGCCGTGGT CTACTACCCC GTGCAACGCG CCGTGTACAT GTCCTCTACG
CATGTGGCCA TGGCGTACCG CCTGTACAAG GAGGGCGGCG ATGCCCACGT GCTTAAGTCG
GTGGTGGGCA TAATGTGGGG GAAGGAGTAC GCGTGGCACC TCCCCGAGGT GGCGAAGGCC
CTTGAGAACG GCACAATCAG GGACGTGGGG CCCGCCAGCT CGCCCAACTA TGAGCAAATA
GCCGCGCTGA AGCCAGACGT GGTCTTTGTC TACTTCTACC CCGGCCCCTA CGGCACAGAG
GCGGTGATAC AGCGGCTTGA CCAGTTGAAA ATCCCCTACG CCGTGGTCAA CGAGTTCCAG
GAGGGGTCCC CCCTGGGCAG GGCCGAGTGG ATAAAGTTCA TAGCCGCCTT CTACAACCTC
ACCGACGCGG CCGTCAAAAT CTTCGACGGG GCGGAGGCCA AGTGGAACAG CCTAGCCGCG
TTGGCGAGGG AGGCCGAGCA TAGGCCAAGG GTGGCCTGGT TCATAATATT CGGCGGCGTC
CTGTACCCAG CGGGGCCGCA GGTGAGAGAG CTCATATCCC TCGCCGGGGG CCGCTACGCC
TATTCAAACT ACAGCCGCGT AGACCTGGAG GTGGTGCTGA AGGAGAAGGA CGTGGACGTC
CTCGTGTGGT CGGGCTATGG CGTGCAGTCC GTCTCCGACA TTTTGAAAAT CGAGCCGAGG
CTCTCCGAGC TAAAGGCCGT CGCAGTGGGC AGATTATACG CCTACAGCGA CGCCTTCTAC
CAACTCGCCA ACGCATACCC CGACCAAGTG CTCGAAGAGC TACTCTGGAT AATACACCCC
GAGCTGGCCC CGCCGGGCAA CTTCACCCTC TTTGTGCCAC TGAGGTGA
 
Protein sequence
MSQKITLGLA AAALLISILA VALAWSTSAK VEEALHATGQ ELGALTSAVK SLNSTLASLA 
SGVEQRLANV EREAAAAKNA TAILLKAAQA PAGEVPVKYA KLFSIRYEGG YYVLRDALGR
TILLAPRGAG PALTKFYVDK YKPAAVVYYP VQRAVYMSST HVAMAYRLYK EGGDAHVLKS
VVGIMWGKEY AWHLPEVAKA LENGTIRDVG PASSPNYEQI AALKPDVVFV YFYPGPYGTE
AVIQRLDQLK IPYAVVNEFQ EGSPLGRAEW IKFIAAFYNL TDAAVKIFDG AEAKWNSLAA
LAREAEHRPR VAWFIIFGGV LYPAGPQVRE LISLAGGRYA YSNYSRVDLE VVLKEKDVDV
LVWSGYGVQS VSDILKIEPR LSELKAVAVG RLYAYSDAFY QLANAYPDQV LEELLWIIHP
ELAPPGNFTL FVPLR